| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6267 |
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| Symbol | |
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| ID | 7381307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1260267 |
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| End bp | 1261802 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649729 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002547953 |
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| Protein GI | 222107162 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGTG TCCAAACCAC AAAGCTTGAT GCAGTACCGC TCGGTGATCG CGCACCGATA
CTGGAGATGC GCGGCATTTC GCAGATCTTT CCGGGTGTGA AGGCGTTGGA TGGCGTGAAT
ATCGCCCTTT ATCCCGGGGA GGTGACGGCA TTGATCGGCG AAAATGGCGC TGGTAAATCG
ACGCTGGTCA AAATCCTGAC GGGCATTTAC CGGCCCAATG AGGGGGAGAT CGTCATTGAT
GGTTCGCCGG TGACCTTCGC CGATGCCCAG GCCGCCATCG ATGCGGGCGT GACGGCCATC
CATCAGGAAA CCGTGCTGTT CGATGAGCTA AGCGTTGCGG AAAACATTTT CCTCGGCCAT
GCGCCAAAAA CCCGCTTCGG CTTCATCGAC TGGAACGGCA TCAACACCAA AGCCAGGGCG
CTGATGGATC GGCTGGAAAG CAAGATCGAT CCGACCATTA GATTGAAGGA TCTCTCCATT
GCCCAGCGGC ATCTGGTGGC GATTGCGCGG GCGCTCTCGG TTGAAGCGCG GATCGTTATC
ATGGACGAGC CGACGGCTGC CCTGTCACGT AAGGAAATCG ATGATCTGTT TCGCATCGTT
GAAGGGCTGA AGCGGGATGG CAAGGCGATC TTGTTCATCA GTCACAAGTT TGATGAAGTC
TATGAAATCG CCGAAAATTA CGCGGTATTC CGCGATGGGA AAATGGTCGG TGCGGGGCGA
CTGCAATCAA CACCACAGGA TGAGATCGTC CGGCTGATGG TTGGTCGGGA TGTGCATGAT
GCTTTTCCAA AGATTGACGT TTCCATCGGC GCGGCGGTGC TTTCCGTTTC TCGCTATTGT
CATGATACCG AATTTCGCGA CATTTCCTTC GACTTGCGCA AGGGCGAAAT CCTGGGTTTT
TACGGCTTGA TTGGGGCGGG GCGTTCCGAG TTATGCCAGT CGCTTTTTGG CATCACTCAC
CCGGCTTCAG GCACGGTGAC GCTGGAGGGC AGGGCGCTCG ATATTCGCTC GCCCGCTGAC
GCCATTGCCG CTGGCATCGT CTATGTGCCG GAAGAGCGCG GGCGTCATGG GTTGGCGCTG
CAAATGCCGA TTTACCAGAA TATGTCGCTT CCATCGCTGG CGCGTGTTTC GGCCCGCGGC
TTTCTGAAGG TTGTCAATGA GTTGGCTCTC GCGCGCCACT ATGCCGAGCG GCTGGACCTG
CGGGCGGCGG CCCTGTCTGT GCCGGTCGGG ACGCTTTCAG GGGGAAATCA GCAGAAAGTA
GTGATTGGCA AATGGCTGGC CACCAAGCCA AAGGTCATCA TTCTCGATGA GCCGACCAAG
GGGATCGATA TCGGCTCCAA GGCCGCCGTG CATGGTTTTA TTTCCGAACT GGCGGCAGAG
GGCCTGTCAA TCATCATGAT TTCCTCCGAA CTTCCCGAGA TTCTCGGCAT GTCCGACCGG
GTGATGGTGA TGCGCGAGGG ATTGCAGGCT GGAATTTTTG AGCGGGAGGC GCTGACACCG
GAAGTTCTGG TGCGTGCTGC AACTGGCAAT GCGTGA
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| Protein sequence | MMSVQTTKLD AVPLGDRAPI LEMRGISQIF PGVKALDGVN IALYPGEVTA LIGENGAGKS
TLVKILTGIY RPNEGEIVID GSPVTFADAQ AAIDAGVTAI HQETVLFDEL SVAENIFLGH
APKTRFGFID WNGINTKARA LMDRLESKID PTIRLKDLSI AQRHLVAIAR ALSVEARIVI
MDEPTAALSR KEIDDLFRIV EGLKRDGKAI LFISHKFDEV YEIAENYAVF RDGKMVGAGR
LQSTPQDEIV RLMVGRDVHD AFPKIDVSIG AAVLSVSRYC HDTEFRDISF DLRKGEILGF
YGLIGAGRSE LCQSLFGITH PASGTVTLEG RALDIRSPAD AIAAGIVYVP EERGRHGLAL
QMPIYQNMSL PSLARVSARG FLKVVNELAL ARHYAERLDL RAAALSVPVG TLSGGNQQKV
VIGKWLATKP KVIILDEPTK GIDIGSKAAV HGFISELAAE GLSIIMISSE LPEILGMSDR
VMVMREGLQA GIFEREALTP EVLVRAATGN A
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