| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6219 |
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| Symbol | |
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| ID | 7381267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1215168 |
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| End bp | 1215992 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649689 |
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| Product | transcriptional regulator |
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| Protein accession | YP_002547913 |
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| Protein GI | 222107122 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0474635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACACC ATCCTGATCC GATTTTGGAT TTTGATCTAC AGGCCTATAT CGACGATCAA
CTGAACGTTC AGCGGCGGAT TGAGGTCGAG GCCTATCTTT CCAGGCATCC CGATGCGGCG
GCGCGGATGA TGGCCGACCT GCGTGTGCGG GACGAGTTGC GCCTGGGGCT GGCCCATGAC
CGAATGGCGC TTGATTTGGG CGCGGCGCGG CCCGCGACCC GGGATGCGGC TCGCCGGCTG
GAGCAGGCTT TGATGCATGC AGGCCGTATG ACAGTGCTAC GCCGCGCAGC TGCCATAGCA
ATTTTCATCG GCGTAGGTTG GGTCGCACAT TCCGTGATCA ATCCATTCGC GGCGACGCAG
GTCATAGCCT CCGTTCCGAC GCCAGCCTTT GTGCGGGAAG CACTGCAAGC CCATGAAACG
ACCTTGCTGC GCGAAAGTCT TCATCCTCAG CAGATCGCCC AAGATCAAGT CGGTCAGGGC
CAATCCGGGG CGCCGATGTT TGACCGCAAG GAAATTCGCT CTGCCACTGG CATCGTCATG
CCGGATCTGC CCAGCAATTG GACGATTGCC GATAGCCAGA TTTTCCCTTC GGCTTACGGA
CCGAGTGTTG AAATCGCCGT CAAGCCGAAG CGGGGCTCGG AGGTGACGTT GTTTGCCGCC
CGCACCGGCT CCTTCGCTGT CCAGAATGTC ACGCTCGCTC AGACGGATGG TGCAAAGGCT
GCTTATTGGC AGATCGGCGA GGTCGCTTAC GCGCTGGTGT CGAAGGACCG CTCGGGCGAC
GAATTGACAG ATGTGGCGGG CCAGCTTGCC AGGACGCTTT ACTGA
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| Protein sequence | MTHHPDPILD FDLQAYIDDQ LNVQRRIEVE AYLSRHPDAA ARMMADLRVR DELRLGLAHD
RMALDLGAAR PATRDAARRL EQALMHAGRM TVLRRAAAIA IFIGVGWVAH SVINPFAATQ
VIASVPTPAF VREALQAHET TLLRESLHPQ QIAQDQVGQG QSGAPMFDRK EIRSATGIVM
PDLPSNWTIA DSQIFPSAYG PSVEIAVKPK RGSEVTLFAA RTGSFAVQNV TLAQTDGAKA
AYWQIGEVAY ALVSKDRSGD ELTDVAGQLA RTLY
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