| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6106 |
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| Symbol | gldA |
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| ID | 7380759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1129605 |
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| End bp | 1130729 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649602 |
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| Product | glycerol dehydrogenase |
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| Protein accession | YP_002547827 |
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| Protein GI | 222107036 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.25848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCAA GAGGCTATGG TGGACCGCTG CGGTATGTTC AGGGACCGGG TGTCATCAAT
GAAATCGGGC TTTATATCGC GCCGCTGTCA AACTCGGCAC TGATCGTTAT CGATGGGTTT
TTCTGGGATA CTCTTCGCCC AGAAGTGGAA AAAAACCTTG ATGCCCATGG GGTGAAAAGC
CATTTCATGA AATTTTGCGG CGAATCCACG GATAAGGAAG TTGAGCGGGC CGTGAGCCTC
GGCAAAACAG CTGGTGCTGG CGTTGTTATT GGGATTGGCG GCGGCAAGGC GCTCGATACG
GCCAAGATTT CCGCGCTTCA TATTGGTGCA CGCACGGTAA CTGTCCCCAC CATCGCCTCG
ACTGATTCCC CAACCAGTGC GCTGGGCGTG ATTTACAGCG AGGACGGGGT CTACGACCGG
GTGGTGCGTT GTGGCCGCAA TCCGGATGTG GTTTTGGTGG ATAGCGCCTT GATTATCAAG
GCTCCGGTCC GGTTTCTGGT CGCGGGCATG GGCGATGCAT TATCGACCTG GTATGAGGCG
CGCTCCAATT TTGAAAGCCA TTCAAACAAT TATATCGGCG ATGGCTATGG AACCACGGCG
GCGGGGGCAG CCATTGCCCG GCGTTGCCAT GAGGTCCTGA TGCGTGATGG CCGGGCCGCT
TACGCTGCCG CCATTGATGG CAAGCTGACG CCTGCGGTGG AAAATATCAT TGAGGCCAAT
ACGCTTTTGA GCGGTCTTGG CTTTGAAAAT TGCGGTGTCT CCGGTGCCCA CGGCATCCAT
GATGCGCTGA CCGTGCTGGA GCCGACCCAT CATTTCTTCC ACGGCGAAAA GGTTGCTTTC
GGCATTATCG GCCTGCTGGT GCTGGAAAAC CGTCCGTTGG ATGAGATCAA CGAGGCCATC
GACTTCTGCC AGGACCTGAA ATTGCCGACA ATGCTTGGCG ATCTCGGGCT GGAGACGGTC
ACAGCGGAAG ACCTGCTGAA AGTCGGTGAG ATTGCTATGG CTCCAGCCAG CGTCATTCAC
TCTGTCCCGG TTAAACTGAC ACCAAGACTG ATTGCAGATT GCATCTGGAC AGCGAGTAAG
CTGGCCGAGA CTCGCAAGCA GTCGAGGGCG GGGAGGGTGC TTTGA
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| Protein sequence | MTSRGYGGPL RYVQGPGVIN EIGLYIAPLS NSALIVIDGF FWDTLRPEVE KNLDAHGVKS
HFMKFCGEST DKEVERAVSL GKTAGAGVVI GIGGGKALDT AKISALHIGA RTVTVPTIAS
TDSPTSALGV IYSEDGVYDR VVRCGRNPDV VLVDSALIIK APVRFLVAGM GDALSTWYEA
RSNFESHSNN YIGDGYGTTA AGAAIARRCH EVLMRDGRAA YAAAIDGKLT PAVENIIEAN
TLLSGLGFEN CGVSGAHGIH DALTVLEPTH HFFHGEKVAF GIIGLLVLEN RPLDEINEAI
DFCQDLKLPT MLGDLGLETV TAEDLLKVGE IAMAPASVIH SVPVKLTPRL IADCIWTASK
LAETRKQSRA GRVL
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