Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6060 |
Symbol | |
ID | 7380883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 1080351 |
End bp | 1081715 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649560 |
Product | hypothetical protein |
Protein accession | YP_002547785 |
Protein GI | 222106994 |
COG category | [S] Function unknown |
COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGCCCGCA AGACACAGCC CGGCCATGTG CGCATCGTCA TATACGAACC GCGGGCAAGA CTTGGCGGCG GCCTTGCCTA TGACACGGTC GATCCGGCTC ATCGTATCAA TGTCCCGGCA GACAGGATGA GCCTCGATCC GGACGAACCT CTCGACTTCC TCGATTGGGT CGGCAAGCAC CGTCTGGGTG AGGAAGACAG GCAAGCGGCT TTGGACGATG GCAGGATATT TCCGCGCCGC CGCGATTTCG GTGTCTATAT CGCCTCGAAG CTGGCACCTT ATCTGGCCGA TGGCCGGATA GAGCATGTCA AATCCGATGT CGTTGCGCTG GACCCGTCCA CCCGCGGCTG GCGCGTAACA CAAGCGGATG GAACAACACT GGAGGCAGAT GATGTGGTGA TTGCCACCAG TCATCCCTCC CCCAGGCCAC CAAAGGCGCT TGCCACCATT CTGGAAGGAC ACCCACGCTT CATTCCCGAT GCGACCGTGC CGGATGCGCT CAACGTCATT CGCCCGGAAG ACAATGTATT GATTGTCGGT AATGGCCTGA CGGGTGCCGA TATCGCTGCG TCCTTGCTGG CGCGACACCA TCAAGGGCCG ATCACCAGCA TTTCAAGACG TGGCCTGCGT TCCAGAGGCC ATGCCGGGAC GGTACAGGAG CCCTATGGGG ACTTTATCGA CCCGCCCAGT CGGTCGATCC GGCATCTGAC GCGCCGCATC CGTGAACAGA TCAACCATGC CGCAGCGGAA GGCATCAGTT GGCATGCCGT GCTGGATGCG GTTCGCGCTC AGGCCCAGGA GATCTGGGGC GCACTACCGC TCGATGAGAG GCGGCGCCTG GTGCGCCATC TGCGCCCCTT TTGGGATGTG CATCGATTCC GCATCGCCCC GCAAGTGGAA GGGGCCATCA ACCAGGCGAT CAGCAGGGGC CAGATGGAGA TACTGGCAGC GTCGGTACAA ACAGTATCCT ATGATGGCTC GAAAATTCGT GTCTCCCTAC GTCTGGCGCG CAGTACCGAA AAGGTGTCGT GTGTTGTCGA TGCCGTGGTC ATTGCCACCG GTCCGGCGCA TGGCGCCATC ATCGATAACC AGCCTTATCT CCGCAACCTT GCGCTTAAGG GCTTGATCGG CCTCGACCCG ACCGGTCTTG GGCTGCATTG CGACCGGCAA TCGCGCCTTC TCGACCAGCA TGGAGCGGTA ACGCCGGGCC TACTGGTCGC CGGACCGCTT GCCCGTGGTA CCTTCGGGGA ATTAATGGGT CTTCCCCAGG TCGCGCATCA TGCTCGCGAC ATCGCCGATC ATCTATATGC GCGGCTTGAG GAAGCCCATC GCGATGCGCC AGTAACCGCC GAAGACGCAG CATAA
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Protein sequence | MARKTQPGHV RIVIYEPRAR LGGGLAYDTV DPAHRINVPA DRMSLDPDEP LDFLDWVGKH RLGEEDRQAA LDDGRIFPRR RDFGVYIASK LAPYLADGRI EHVKSDVVAL DPSTRGWRVT QADGTTLEAD DVVIATSHPS PRPPKALATI LEGHPRFIPD ATVPDALNVI RPEDNVLIVG NGLTGADIAA SLLARHHQGP ITSISRRGLR SRGHAGTVQE PYGDFIDPPS RSIRHLTRRI REQINHAAAE GISWHAVLDA VRAQAQEIWG ALPLDERRRL VRHLRPFWDV HRFRIAPQVE GAINQAISRG QMEILAASVQ TVSYDGSKIR VSLRLARSTE KVSCVVDAVV IATGPAHGAI IDNQPYLRNL ALKGLIGLDP TGLGLHCDRQ SRLLDQHGAV TPGLLVAGPL ARGTFGELMG LPQVAHHARD IADHLYARLE EAHRDAPVTA EDAA
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