| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6046 |
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| Symbol | impG |
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| ID | 7380872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 1064976 |
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| End bp | 1066757 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649549 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547774 |
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| Protein GI | 222106983 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.739276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGA CCTTTCTGGA ACGCTATAAT GACGAATTGT TCGCGCTGCG CAGGCGTGCG
GAAAAGTTCG CCCGCGCCTT CCCGAAAATC GCCGGTCGGT TGCGTCTGTC GGGTGATGTG
GCCGACGATC CGCATGTAGA GCGGATCATC CAGAGTTTCG CCTATTCCGC CGCCCGCGTT
CGCCAGAAAC TGGATGATGA ATTTCCGGAA CTGACCGACA GCCTGCTGGA AACGCTTTAT
CCCCATTATC TGGCGCCGGT GCCGCCGATG AGCATCGTGC AATTTGCGCC AGGCGCAACG
CTGGCTGGTA TGCAATTGCT GCCGCGCCAT ACCGACATCG TCACCGAGCC GGTCGGCGGC
GATCCCTGCC AGTTCCGCAC CACGCAGGAT GTGGAAATTG TCCCGATGAC GGTCAGCAAT
GCCAGCCTGA CCGGCTTGCC ACTCGATGCG CCAGCGGCAC CCTTTGCAGG TGCAGCAGGC
GTGTTGCGTC TGTCCCTGCG CTCTACGGCC CCCAAGCAGG ACAGCATGGC CGGGCTTGGC
GTCAAGCGCC TGACTTTTTT CATTGCCTCC GCATGGGCGC AGGCCGCCGC CCTGTTCGAG
CTTCTGGCCA ATCATTGCAT CGGCATGGCG CTGGCACGCC ATTCGGAGGA TCGCAATGCG
GTCTTTCTGC CAGCGGAAAA CCTGCGTCCA CTGGGGTTTG CGCCGGAGCA GGCGATGCTT
CCCACGGCAC CGGGCAGTTT TGCCGGATAC CGGCTGCTGA CCGAGTTTTT CACGTTGCCG
CAAAAATTTC TGTTCCTGGA AGTATCCGGC ATGGATCGCT GGCAGGGCGA TGATGTCGAG
CTTTACATCT ATCTGGACAG CAGTGATGCG CGACTGGAGC GGATGATTTC CGCCAGCGAC
ATCGTCCTCA ATGCCACCCC GGTCATCAAT TTGTTCCGGC AAAGCTCGGA ACCGCTGACA
TTGGATGGCA GCCGCACGGA ATATTCGCTC CTGCCCGACA GCCGCCGCCA AACGACCCGG
GAAATCTACA TGGTCGAACA GGTCCGGCTT TCGGCGGCGT CCGGCGAAGA ACAGGATGCC
CGGCCATTTT TCGGGAGCAG CCAGCGGGGC GCCAATAGCA GTGTGTTCTG GCAGGCGGTT
CGCCGGTTCG ATGAGGATGA CGGATCATCG GACACCCAGA TCGCCTTCGT TGATCGCAAT
CGCGGTCCGC TTGAGCCGAC CGGACTGACG GCCAGCGTCG ATACCCTATG CCTGAACAGA
GACCTTGCCA GCCAATTGCC TTTCGGCGGC GGTCACCCGC ACCTTCAATT GGTCAAGCGC
AGTGAAAGCG TGGCCGAGAT CAAGGCGCTT TTACCGCCAA CGCCCGCCAT TCGTATCCAT
GAAAAACTGG CGCGCCAGTG GCGGCTGGTC TCCCATCTGC TGCTCAATCA TCTGTCACTG
TTCGACAATG ACGGTTCGGC ACTGAAGGAT ATTCTTTCGC TCTATGCATT GCGCGATGCG
CCGGAAACGC GACAGCTTGT CGAGGCCATC AGCCGCGTCG AGGCAAAACA TGCACTCGCC
CGGCTTGGCC CCGCCATGGT GCCAGGCACC GATGTCACGA TCGAATTCGA CCCGGCTATG
ATCGACCGGG CGGCCGCTTT CATCTTCGGC AGCATCATTG ATCATTTCTG CGGGCTCTAT
ACCTCGGTCA ACAGTTTCAC CCGGCTGACC CTCACCATGC GCGGCCAGTC CGAGCCAATT
GTCCGCTGGC CCGCCCGGGC CGCCGAGCGG CCTTTGCTGT AG
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| Protein sequence | MAETFLERYN DELFALRRRA EKFARAFPKI AGRLRLSGDV ADDPHVERII QSFAYSAARV
RQKLDDEFPE LTDSLLETLY PHYLAPVPPM SIVQFAPGAT LAGMQLLPRH TDIVTEPVGG
DPCQFRTTQD VEIVPMTVSN ASLTGLPLDA PAAPFAGAAG VLRLSLRSTA PKQDSMAGLG
VKRLTFFIAS AWAQAAALFE LLANHCIGMA LARHSEDRNA VFLPAENLRP LGFAPEQAML
PTAPGSFAGY RLLTEFFTLP QKFLFLEVSG MDRWQGDDVE LYIYLDSSDA RLERMISASD
IVLNATPVIN LFRQSSEPLT LDGSRTEYSL LPDSRRQTTR EIYMVEQVRL SAASGEEQDA
RPFFGSSQRG ANSSVFWQAV RRFDEDDGSS DTQIAFVDRN RGPLEPTGLT ASVDTLCLNR
DLASQLPFGG GHPHLQLVKR SESVAEIKAL LPPTPAIRIH EKLARQWRLV SHLLLNHLSL
FDNDGSALKD ILSLYALRDA PETRQLVEAI SRVEAKHALA RLGPAMVPGT DVTIEFDPAM
IDRAAAFIFG SIIDHFCGLY TSVNSFTRLT LTMRGQSEPI VRWPARAAER PLL
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