Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6040 |
Symbol | impM |
ID | 7380866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 1054796 |
End bp | 1056247 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649543 |
Product | serine/threonine phosphoprotein phosphatase |
Protein accession | YP_002547768 |
Protein GI | 222106977 |
COG category | [S] Function unknown [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase [COG3913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTGC GACCTGCCCA GACAGAAAAG CCCGCCAATC AGGACCGGAT CGGGTTTTTC GGCAAATTAC CAAGCCATGG CGACTTCCTC TCGGATGGCC TGGAACGGGA GATGGTCGCG ACGCTCGATG GCTGGATCCG TGGCGGCCTG CACGCCTGTG AACAGGAATT CGGCTCGGCT TGGCCGGAGC TATTCAGCGC CTCCCCTCCT TGGCGGTTCA TCGTCGAAAA AGGCGTCTGG GGCCAAGTGG CTCATGCGGG TGTCATGCTG GCCAGCCGTG ATCGGGTTGG TCGCAGTTTT CCGCTGATCA TCATGGCGCA GATGCACCGC TTCACCCATC ACCCCCGCAC GCTGTTTCTG GACCATACTT GGTTCATGGC CGCCGAAGGC CTGGCTGAAT CGACGATGAC GCGGGAATTT GACATCAACC GCTTCACTGA AACCCTGAAG CGCATGCGTA TGCCCCGTCC CCAGGAGGAA GAGGGCACCG CCACCGCCAG CAAGGATGGC ACTGCGCTCT GGTGGTATAT CGACCCGCAG ACCTCAAAAC CGCAGGGCCT TCGCTTTTCA AGCCAGATGA AGGCCGAGGA CTTCCTGCGG CTTTTCCGGC AAAGCGCCGG CCTTACATCC CGACCACAAG ACACAACCGC CCCTGCCTCA TCCCGTGCCC CAGGGCCAGT CCCGATAAAA GCCGAGGCAA GACCTGCGCC TCAACGGACC GCTCCAAGCC CGGATAAGCC GCCCAGAGAC CAACAAGCAC CTGAGCCGCA AGCAGCAGGG CTACGGTATA GTTATGCCAC CCATGCCGGC ACACGATTTT CGATCAATGC GGATGGGCTA TTCATCTGCG AAAAACCAAG GATTTTCGCC ATTGCCGACG GTGTTGGCGA CGACACCGCG TCGCAGGAAG CCGCACGCTA TACTGCAGGC CAACTGGCCG AAATCGGTGA GACCGCCGAT CTGGACACCA TATTGCAGGA AATCAAAGGC AAGCTTGGCA GGGCCAATAG CCTGTTGCAG GCCCGCACGC AACGCACAGA CGGAACCGCA CCCGCCGCCA GCGTTGTTGT TGCCGCCTTG GTGAATCATC AACTTCTGCT GGTTTGGGCG GGGGATGCTA GGGCCTATCT GTTGCGTGAC GGCACAATGG TACCACTGAC CCGCGACCAT ATCGCCATCG GCCTGCAAAA ACGACTGCGG CGCGGGGTAG GATTGGATCA GCAATTTTTG CCGGAAACGC TGACCACCGA CATATTACCG GGCGACCGCC TGTTGTTATG CAGTTTTCCG CTGATCCAGG TCCTGACGGA GCGAACCGTC GCGGAAATTC TGCACCAATG CACCGATACA GAAAGCGCCG AGCGGTTGGT TCAGGAGGCT TTGATTGCCA ATGTGCGCGA AAATGTGAGC GCTATCGTCG TTAGCCTGGC ACGTAGCGAT GCCTCTGCCT GA
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Protein sequence | MALRPAQTEK PANQDRIGFF GKLPSHGDFL SDGLEREMVA TLDGWIRGGL HACEQEFGSA WPELFSASPP WRFIVEKGVW GQVAHAGVML ASRDRVGRSF PLIIMAQMHR FTHHPRTLFL DHTWFMAAEG LAESTMTREF DINRFTETLK RMRMPRPQEE EGTATASKDG TALWWYIDPQ TSKPQGLRFS SQMKAEDFLR LFRQSAGLTS RPQDTTAPAS SRAPGPVPIK AEARPAPQRT APSPDKPPRD QQAPEPQAAG LRYSYATHAG TRFSINADGL FICEKPRIFA IADGVGDDTA SQEAARYTAG QLAEIGETAD LDTILQEIKG KLGRANSLLQ ARTQRTDGTA PAASVVVAAL VNHQLLLVWA GDARAYLLRD GTMVPLTRDH IAIGLQKRLR RGVGLDQQFL PETLTTDILP GDRLLLCSFP LIQVLTERTV AEILHQCTDT ESAERLVQEA LIANVRENVS AIVVSLARSD ASA
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