| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5971 |
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| Symbol | frcB |
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| ID | 7381055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 986696 |
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| End bp | 987721 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649483 |
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| Product | ABC transporter substrate binding protein (sugar) |
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| Protein accession | YP_002547714 |
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| Protein GI | 222106923 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00726122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCA ATTTGATCGG CGCCACGCTT GGCGCCCTGG CTCTCGGCGT TGTCTTTTCG
ACAGGCGCAC AGGCTGCTGA CGTTTCAGCC TGCCTGATCA CCAAAACCGA TACCAATCCA
TTCTTCGTCA AGATGAAGGA AGGCGCTTCC GCCAAGGCCA AGGAACTGGG CGTTACGCTG
AAGTCCTATG CCGGCAAGAT CGACGGCGAT AGCGAAAGCC AGGTTGCAGC CATTGAAACC
TGCATTGCCG ATGGTGCCAA GGGTATCCTG ATCACCGCCT CCGACACCAA GGGCATCGTG
CCTGCCGTCA AGGAAGCCCG CGACGCTGGT CTTCTGGTGA TCGCACTCGA TACGCCGCTT
GATCCGGTCA ATGCCGCTGA CGCGACATTT GCGACCGACA ACCTTCTTGC TGGCAAGCTG
ATTGGCCAGT GGGCTGCCGC CACCCTGGGC GACAAGGCCA AGGATGCCAA GGTTGCCTTC
CTCGACCTTA CCCCTGCCCA GCCATCGGTT GACGTTATGC GCGACCAGGG CTTCATGATC
GGCTTCGGCA TTGATCCGAA GGACCCGAAC AAGATTGGTG ACGAAACCGA CCCGCGCATC
GTCGGCCACG ACATCACCAA CGGCAACGAA GAAGGTGGCC GTACGGCCAT GGAAAACCTT
CTGCAGAAAA ACCCGAACAT CAACGTTGTT CACACGATCA ACGAACCAGC CGCTGCCGGT
GCCTATGAAG CCCTCAAGGC TGTTGGCAAG CAGAAGGACG TGCTGATCGT ATCGGTTGAC
GGCGGCTGCC CTGGCGTGAA AAACGTCAAG GAAGGCGTGA TTGGTGCGAC ATCGCAGCAG
TATCCGCTGA TGATGGCAGC CCTCGGCATC GAAGCCATCA AGAAGTTTGC TGACTCTGGC
GAAAAGCCAA AGCCAACCGC TGGCAAGGAC TTCTTTGATA CGGGCGTTTC GCTCGTCACC
GACAAGGCTG CTAAGGGCGT ACCGTCAATC GACGTCGCCG AAGGCCTGAA GAAGTGCTGG
GGCTGA
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| Protein sequence | MKTNLIGATL GALALGVVFS TGAQAADVSA CLITKTDTNP FFVKMKEGAS AKAKELGVTL
KSYAGKIDGD SESQVAAIET CIADGAKGIL ITASDTKGIV PAVKEARDAG LLVIALDTPL
DPVNAADATF ATDNLLAGKL IGQWAAATLG DKAKDAKVAF LDLTPAQPSV DVMRDQGFMI
GFGIDPKDPN KIGDETDPRI VGHDITNGNE EGGRTAMENL LQKNPNINVV HTINEPAAAG
AYEALKAVGK QKDVLIVSVD GGCPGVKNVK EGVIGATSQQ YPLMMAALGI EAIKKFADSG
EKPKPTAGKD FFDTGVSLVT DKAAKGVPSI DVAEGLKKCW G
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