| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5962 |
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| Symbol | |
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| ID | 7381046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 978458 |
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| End bp | 979819 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649474 |
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| Product | nitrilotriacetate monooxygenase |
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| Protein accession | YP_002547705 |
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| Protein GI | 222106914 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGCA CCGACACATT GAAACTTGGA ACCTTCGTCT ACACTTTCGG CTTCAACCCG
GCAGCGTGGC GGCACCCGGA TGCCGATGTG CAGGGGGCCA ACAAGATTGA TCACCTGCTG
AACGTGGCAA AAATCTCCGA AGCGGCGAAA TTCGACTTCA TGTTTTTGGC CGATTCTCCC
GCCGCCGCCA TTGGCGATGC CGATGCGCTG GCGCGCTCAC CCACCAAGAT GAACCGGTTT
GAGCCGCTGT CGCTGATTTC GGCGCTGTCC GTGCTCACGG AAAAGCTCGG CTTTGTCGCC
ACCGCCTCCA CCAGCTATTA CGAGCCGTTT AACATTGCCC GCATTTTCGC CTCCATCGAT
CATTTGAGCG GTGGCCGCGC CTGCTGGAAT GTCGTGACCT CCGACCATGA TGAGACCGGC
TATAATTACG GCTTCGAGGG CCTGCCGCCC CATGCGGAAC GCTACGAGCG CGGCTCGGAG
TTCGTCGATG TCGTCTTTGG CCTGTGGGAC AGTTTTGAGC AAGATGCGCT GGTGTTGGAC
AAGGCCAACG GGCTTTACCA CGACAAAGAA AAGCTGCACA CGCTGAACCA TAAGGGCAAG
CATTTTCAGG TGCGCGGCCC GCTCAACATT GCAGCAAGCC CCCAAGGCCG CCCGGTGATT
GCGCAAGCCG GTGGCTCGGA AGCGGGCATG GAACTGGCGG CCCGCACCGC CGAAATCGTC
TTCAGCCTCG CCTCCAATCT GGAGCGCAAC AAGGCTTTTG CCGACAATAT CAAAGGCCGC
ATGGCCAAAT ATGGCCGCTC TACCAACGAT CTCAAGTTGA TGCCCGGCTT GGTGGTCAAC
GTTGGCGAAA CCAAAGCCGA GGCGCAAGCC AAGGTCGATT TCCTGATCGA CAACCTGCAC
CCCGATGTGG GCCGCTGGAT GCTGGGAGAA TTTCTGGAAG CCGATCTTTC CGGCGTGGCG
CTCGACCAGC CCTTCCCGCT GGAGCGCCTG CCCGCCGAGC CAAAAGGCTC GAAAGCCATG
TTTGAATGGT TGCGTGACTT CATCATGGAA GGCCACACCG TTGGCGAGCT GATCCGCTTC
TACGCCGAGA AAAGCACCGG CAATGGCATC ACCGGCACCC CCACTGAGAT CGCGGATTTT
ATGGAAGAAT GGTTCCAGGC CGGGGCCGCC GATGGCTTTA TTCTGATGCT GCCAACCCTG
CCCGCCAGCT TGAATGATTT TGTGCGGCTG GTGCTGCCGG AATTGCGCAG GCGCGGATTG
TTCCGGGAAG AGTATGAGGG CAATACGCTG CGGGAGAATT TGGGGCTGTC GATGCCGGTC
AATCGGTATG TGGCGGCGCG AAATGGTGGG GTCGCCAAAT AA
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| Protein sequence | MARTDTLKLG TFVYTFGFNP AAWRHPDADV QGANKIDHLL NVAKISEAAK FDFMFLADSP
AAAIGDADAL ARSPTKMNRF EPLSLISALS VLTEKLGFVA TASTSYYEPF NIARIFASID
HLSGGRACWN VVTSDHDETG YNYGFEGLPP HAERYERGSE FVDVVFGLWD SFEQDALVLD
KANGLYHDKE KLHTLNHKGK HFQVRGPLNI AASPQGRPVI AQAGGSEAGM ELAARTAEIV
FSLASNLERN KAFADNIKGR MAKYGRSTND LKLMPGLVVN VGETKAEAQA KVDFLIDNLH
PDVGRWMLGE FLEADLSGVA LDQPFPLERL PAEPKGSKAM FEWLRDFIME GHTVGELIRF
YAEKSTGNGI TGTPTEIADF MEEWFQAGAA DGFILMLPTL PASLNDFVRL VLPELRRRGL
FREEYEGNTL RENLGLSMPV NRYVAARNGG VAK
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