| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5956 |
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| Symbol | hutU |
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| ID | 7381041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 971515 |
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| End bp | 973188 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649469 |
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| Product | urocanate hydratase |
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| Protein accession | YP_002547700 |
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| Protein GI | 222106909 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2987] Urocanate hydratase |
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| TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACC CACGCCACAA TATCCGCGAT GTGCGGGCTG CCACGGGCAC GGAGCTATCG
GCCAAGAGCT GGATGACCGA AGCCCCCTTG CGCATGTTGA TGAACAATCT CGACCCCGAC
GTAGCCGAGC GTCCGCATGA GCTGGTGGTC TATGGCGGCA TTGGCCGCGC CGCCCGCACA
TGGGAGGATT TTGACAGGAT TGTTGCCACG CTGAAGACGC TGACCGAAGA AGAGACGCTG
ATTGTGCAAT CGGGCAAGCC AGTGGGTGTG TTCAAAACCC ATAAAGACGC GCCACGGGTG
CTTATTGCCA ATTCCAATCT CGTGCCGCAT TGGGCCACAT GGGACCATTT CAACGAGCTG
GATAAGAAGG GACTGGCCAT GTATGGCCAG ATGACCGCAG GCTCGTGGAT CTACATTGGC
ACCCAAGGCA TTGTGCAGGG CACCTATGAA ACCTTCGTGG AAGCGGGTCG CCAGCACTAT
AACGGCAACC TCAAAGGTAA GTGGATACTA ACCGGCGGTC TCGGCGGAAT GGGTGGCGCG
CAGCCGCTGG CAGCCGTTAT GGCCGGTGCC TGCTGCCTTG CGGTGGAATG CGATGAAACC
CGCGTGGATT TCCGCCTGCG CACGCGCTAT GTTGATGCCA AGGCCCACAC GCTGGATGAA
GCCCTAGCGT TGATTGACCA ATGGACAAAG GCAGGCGAAG CCAAATCCGT GGGCCTGATT
GGCAATGCTG CCGACATTTT CCCTGAACTG GTCAAGCGCG GTATCCGTCC CGATATTGTC
ACCGACCAGA CCTCGGCGCA CGATCCGATC AATGGTTATC TGCCCTCCGG CTGGACCGTT
GCCGAATGGC GCGCCAAGCA GGAAAGCGAT CCGAAAGCGG TGGAGCGTGC CGCCCGCGCC
TCGATGAAAG TGCATGTCGC CGCCATGGTG GATTTCTGGA ACATGGGCGT TCCCACGCTG
GATTACGGCA ACAATATCCG CCAGGTCGCC AAGGAAGAAG GGCTGGAAAA TGCCTTTGCC
TTCCCCGGCT TTGTGCCTGC CTATATCCGC CCGCTGTTTT GCCGGGGCAT TGGTCCGTTC
CGTTGGGCTG CTCTTTCGGG TGATCCAGAG GATATTTACA AGACCGATGC CAAGGTGAAG
GAATTGTTGC CAGACAACAA GCACCTGCAC AATTGGCTGG ATATGGCCCG CGAGCGCATT
GCCTTCCAAG GCCTGCCCGC CCGCATCTGC TGGGTGGGTC TGGGCGATCG CCACAAACTG
GGTCTGGCCT TCAACGAAAT GGTGCGCAGC GGCGAACTGA AAGCCCCCGT TGTCATTGGT
CGTGACCATC TTGACAGCGG CTCCGTTGCC TCGCCCAACC GCGAAACCGA AGCGATGAAG
GATGGCTCGG ATGCCGTATC CGACTGGCCG TTGCTGAATG CGCTGCTCAA TTGCGCATCC
GGTGCCACAT GGGTATCGCT GCACCATGGC GGCGGTGTGG GCATGGGCTT TAGCCAGCAT
TCGGGCATGG TGATCTGCGC CGATGGCACC GATGATGCGG CGCGGCGCCT GGAGCGGGTG
TTGTGGAACG ACCCGGCCAC CGGCGTCATG CGCCATGCCG ATGCGGGCTA TGACATTGCA
CTGGATTGCG CCAAGGAAAA AGGCCTGCGC CTGCCCGGCA TTCTGGGCAA TTGA
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| Protein sequence | MTNPRHNIRD VRAATGTELS AKSWMTEAPL RMLMNNLDPD VAERPHELVV YGGIGRAART
WEDFDRIVAT LKTLTEEETL IVQSGKPVGV FKTHKDAPRV LIANSNLVPH WATWDHFNEL
DKKGLAMYGQ MTAGSWIYIG TQGIVQGTYE TFVEAGRQHY NGNLKGKWIL TGGLGGMGGA
QPLAAVMAGA CCLAVECDET RVDFRLRTRY VDAKAHTLDE ALALIDQWTK AGEAKSVGLI
GNAADIFPEL VKRGIRPDIV TDQTSAHDPI NGYLPSGWTV AEWRAKQESD PKAVERAARA
SMKVHVAAMV DFWNMGVPTL DYGNNIRQVA KEEGLENAFA FPGFVPAYIR PLFCRGIGPF
RWAALSGDPE DIYKTDAKVK ELLPDNKHLH NWLDMARERI AFQGLPARIC WVGLGDRHKL
GLAFNEMVRS GELKAPVVIG RDHLDSGSVA SPNRETEAMK DGSDAVSDWP LLNALLNCAS
GATWVSLHHG GGVGMGFSQH SGMVICADGT DDAARRLERV LWNDPATGVM RHADAGYDIA
LDCAKEKGLR LPGILGN
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