| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5946 |
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| Symbol | |
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| ID | 7381033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 961645 |
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| End bp | 962583 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643649461 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002547692 |
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| Protein GI | 222106901 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGCAG CAAAATCCTT GGCCTGGGAC GATCTGCGGC TCGTCAAGGC TATCGCCCAG
GCATTGGGCA TGGCTGGGGC GGCTGCGACG CTGGGGATTG ATCATTCCAC CGTGTTCCGC
AGGCTGGGCG CCCTGGAAGA GGCGCTGGGT GTGCCGCTGT TTGAGCGCAG GCGCTCCGGT
TATGCACTGA CGCCGACCGG GGAAGAAGCG GTGCGCACTG CCGAGCGGAT CGAGGCGGAG
GTCGCCCAGC TGGAGCGCCG CCTGCAGGGC CGGGAGATTG CGCCGGCCGG TGAAATCCGG
GTGACGACGG CTGACAGTCT GCTGGTCTAT TTGCTGACGC CCTTGTTTGC CCGCTTCCAG
CAGGCCTATC CTGACATTCA GCTGGATGTG GTGATCGGCA ATAATGCTTT GAACCTTTCG
CGGCGGGATG CTGATATTGC CATCCGCGCC ACGGACAATC CGCCGGACAT GCTTGTCGGG
CGGCGCATCG GCCTGATCGC CTGGGCACTC TACGGTCGCG GCCAGGATTT TGCCGCCGCA
TCCGCCCCTA AGCCGGCAGA ACTCAATGCC GCTCACTGGG CCTGCCTAGG CGAAGACATG
GCGGGGTTGA AAGTGGTCAA GGCGGCCAAG CAGCAGCTGG CGCCAAAACA GCTGCGCTAC
CGCGCCAATT CTGTGCTGGC ATTGGCCGAC GCGGTTGAGG CAGGCATCGG CATCGGCCAT
ATTCCCTGTT TCATCGGCGA CGTACGCCCC GCCCTGGTTC GGCTTTCGCC GACCATTCCT
GATTATTCCG CCAGCCTTTG GCTGTTGACC CATCAGGACC TGCGGCATTC GCCCCGTATT
CGTGTGTTCA TGGATTTCAT TGCCGCTCAG TTGATCCCGC TGCGACCTTT GATCGAGGGG
GAACTGCCGG GCCGTTCCGA CACTCTCCAA CAGCGTTGA
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| Protein sequence | MRAAKSLAWD DLRLVKAIAQ ALGMAGAAAT LGIDHSTVFR RLGALEEALG VPLFERRRSG
YALTPTGEEA VRTAERIEAE VAQLERRLQG REIAPAGEIR VTTADSLLVY LLTPLFARFQ
QAYPDIQLDV VIGNNALNLS RRDADIAIRA TDNPPDMLVG RRIGLIAWAL YGRGQDFAAA
SAPKPAELNA AHWACLGEDM AGLKVVKAAK QQLAPKQLRY RANSVLALAD AVEAGIGIGH
IPCFIGDVRP ALVRLSPTIP DYSASLWLLT HQDLRHSPRI RVFMDFIAAQ LIPLRPLIEG
ELPGRSDTLQ QR
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