| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5918 |
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| Symbol | thiO |
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| ID | 7381009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 927881 |
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| End bp | 928873 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649431 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_002547668 |
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| Protein GI | 222106877 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.669561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATTC TGATCAAGGG GGCCGGCGTT GCCGGCCTCA CATTGGCGTT TGAACTTGTT
CAACGCGGTA TTAATGTCGC GGTGCGCGAT ATCAAAACCT CGGTAGGGCA GGGGGCTTCT
CACTATGCAG GCGGCATGCT TGCACCTTAT TGTGAGCGGG AAGCCGCCGA AGAGCAGGTT
CTGACGCTAG GCCTTGCAGC TGGGGATTGG TGGGAACAGG CTTTGCCTGG CTCCGTCACG
CGCAAGGGGA CGCTGGTCCT CACCCCAAAC CGCGATATCC AGGACCTGAA CCGCTTTGCC
AGCCGCACGC GTGGCTACCA ATGGCTGGAC GCCGATGGCA TCGCCGCATT GGAACCGGAT
TTGGCCGGGC GTTTTCGCAA GGGCCTGTTT TTCGCGGATG AAGCCCACCT CGATCCGCGC
CAGGCATTGG ACGGTCTTTA TCAGGCGTTG GTGCAGCAGG GTGTCTCTTT CTATCTCGGG
CCGGATGCCG AGCTTGATAC CAGCCGCTTT GACAGCATCG TCGATTGTAG CGGTGCTGCC
GCGATCGATA CGATTGAGAA CCTGCGCGGG GTGCGCGGCG AAATGATCTA TCTGCAAACA
GCAGATATAA GCCTGAGCGG CCCCATCCGG CTGCTGCATT CGCGCCATCC GATCTACATC
GTGCCACGCG ACAACAATTG CTTTATGGTC GGCGCCACCA TGATAGAGGC GCGGGATGAC
GGTCCGATCA GCGCGCGGTC TCTCATGGAA TTCCTCAATG CTGCCTACAC GTTGAACCCG
GCTTTCGGCG AGGCCCGGCT GATCGAGACT GGCGTCGGCA TTCGCCCGGC TTTTGCCGAT
AATCTGCCGC GCATTGTCGA GACACCAGAT GGCTTCGCAA TTGCCGGAAT GCACCGTCAT
GGCTTCCTAC TGTCTCCCGC CATGGCCCGG CAGGCGGCGG ACCAGATCGA ACACGCGACA
TCAAATCAAC CCACTCGGAG GGCGACCCGA TGA
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| Protein sequence | MSILIKGAGV AGLTLAFELV QRGINVAVRD IKTSVGQGAS HYAGGMLAPY CEREAAEEQV
LTLGLAAGDW WEQALPGSVT RKGTLVLTPN RDIQDLNRFA SRTRGYQWLD ADGIAALEPD
LAGRFRKGLF FADEAHLDPR QALDGLYQAL VQQGVSFYLG PDAELDTSRF DSIVDCSGAA
AIDTIENLRG VRGEMIYLQT ADISLSGPIR LLHSRHPIYI VPRDNNCFMV GATMIEARDD
GPISARSLME FLNAAYTLNP AFGEARLIET GVGIRPAFAD NLPRIVETPD GFAIAGMHRH
GFLLSPAMAR QAADQIEHAT SNQPTRRATR
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