| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5892 |
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| Symbol | nasA |
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| ID | 7380989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 902631 |
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| End bp | 905288 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649411 |
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| Product | nitrate reductase large subunit |
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| Protein accession | YP_002547648 |
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| Protein GI | 222106857 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.32137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGCG AGACGAAAAC CACCTGCCCC TATTGCGGCG TCGGCTGCGG CGTGATTGCC
AAGGTCGAGG AAAATGGTAC CGTCAGCATC AAGGGCGACC CGGATCATCC GGCCAATTTT
GGCCGGCTCT GTTCCAAGGG CTCGGCGCTG GGTGAAACGC TGGATCTGGA TGGCCGGGCG
CTCACTCCGA CCGTTTACGG CGAGCGCCAA AGTTGGGATA TGGCGCTCGA TCTCGTTGCC
GATAGGTTTT CCCGCAGTAT TGCCGAGCAT GGCCCGGATT CGGTCGCCTT CTATCTCTCC
GGCCAATTGC TGACCGAGGA TTATTACGTC GCCAACAAGC TGATGAAAGG GTTTATCGGC
TCGGCCAATA TCGATACCAA TTCCCGTCTC TGCATGGCGT CTTCGGTCGC AGGCCATAAG
CGGGCCTTCG GCTCCGATAC CGTTCCCGGC ACCTACCGCG ACCTGGAACT GGCCGATCTC
ATCGTGCTTG TGGGATCCAA TATGGGCTGG TGCCATCCGG TGCTTTATCA GCGGATTGCT
GCGGAAAAGG CCAAGCGCCC CGGCCTGAAA GTGGTGGTGA TCGATCCGCG CCGCACCGCA
ACCTCAGACA TTGCCGACCT GCATCTTTCC ATCCGTCCGG ATGGCGATGT GGCACTGTTC
AACGGTTTGC TGGCGCATCT GGTCGAAAAC CGCAGCATCG ACCAATCCTA TATTGCCGCC
CATACAAACG GCTTTGCGGA CGCGTTTGCC GCCGCTGCCG GTCAATCGCT TGGCGATTTG
ATGGAGAAGA CCGGCCTGCC CGCCATGCAG TTGCGGCAGT TTTTCCAGCT GTTTGCCGCA
ACGGAAAAAA CCGTGACCTG CTATAGCCAG GGCGTCAACC AGTCATCGCT TGGCACGGAC
AAAGTCAATG CGATCATCAA TTGCCATCTG GCCACAGGCC GAATCGGCAG GCCCGGCATG
GGACCGTTTT CGCTGACTGG CCAGCCGAAT GCCATGGGCG GACGCGAGGT TGGTGGCCTC
GCCAACATGC TGGCCGCCCA TATGGAACTG GGCAATCCCA GGGATCGGGA TCGCGTGCAG
CGATTCTGGG CCTCCCCCAC CATGGCCGAC AAGCCGGGCC TGAAGGCCGT GGACATGTTC
AAGGCGGTGG CCGATGGCAA GATCAAGGCG CTGTGGATCA TGTCCACCAA TCCTGTTGTC
TCCATGCCCG ATGCCGATGC CGTCAAGGCG GCGATTGCCG CCTGCCCCTT TGTTGTCGTC
TCCGACATGC AGGCCGATAC CGATACGGCA AAGCTGGCGC ATGTGCTGCT GCCAGCGGCT
GGCTGGGGTG AAAAATCCGG CACCGTTACC AATTCCGAGC GGCGGATTTC CCGCCAGCGA
GCCTTCAAAC CGGCCCCCGG CGAGGCCAGG GCAGACTGGT GGCAGATGGC GGAAATTGGC
CGCCGCATGG GCTTTGGCAA GGCCTTTCGC TATCAGTCAC CCGCCGACAT CTTTGCTGAA
CATGCCGCCC TATCGGGTTT TGAAAATACT GGCACCCGCG ATTTCAATAT CGGCGCTTAC
GGCGCGATCA CGGAAACAGA CTATCAGGCG CTTGCCCCCT TCCAATGGCC ACAGAGACAG
GGCGAGCCAG CGGCGGACAG CCGGTTTTTC GCCAATGGCG GCTTTTATCA TCCCGATGGC
AAAGCGCGTT TCATTGCTTG CGAAACTGCA ATACCGGATA GGGCAAGCCA GGACTTTCCC
CTCACGCTCA ATACCGGGCG GGTGCGCGAT CATTGGCATA CGATGACACG GACGGCAAAA
AGCGCGAGGC TGTCAGCGCA TCTGGCCGAA CCCTTCGCGG AAATCCACCC GCTGGACGCC
GCCAATCTCG GCATTGCCGA TGCGGAACTG GTGGAGATTT CCAGCCAGAC CGGCAGCCGG
GTGATCGTTC GCGCCCTTTT GACCAGCCGC CAGAGCCGTG GCGCCATTTT CGTGCCAATG
CACTGGACCG GCGAAACCGC CTCACTGGCC CGCATCGATA GCCTCGTACC CTCGCGGGTG
GACCCGGTTT CCGGCCAACC AGCGCTGAAA CATGTGGGTG TTGCGGCAAA GCCCTATGCG
GCAATCGCCT ATGGTTTTGC CGTCTCAGCT CATAAGCCGC AGGCGCTGGA CGCATCCTAT
TGGGCTTTGG CCAAGGCCGA GCATGGCTGG CGGCTGGAGC TGGCTTTCGA AAATGGCCAG
GATTGGGAAA ACTGGGCGAG AACCGCGCTT GCCGTACCCG CCACCGCAGA GATGATCGGC
TATAGCGACC ATGCCAGTGG CGATGTCCGG CTGGCATTTT TTGACGCAGG CAGGCTTTGC
GCCGCGCTGT TCATGGCAAG CCAACCGGTT GCGGTGTCGC GCAATTGGGC CAGCGCCCGG
CTTGACGACG ACTTTACCGA TCGCCGCACC CGGCTGGCGC TGATTGCCGG GCGGCCCGGC
GCTGGCCAGA TCGATCCGGG GGCAATTGTC TGTTCGTGTT TCTCCGTGGG GATCAACCAG
ATCACCAGTG CTGTCAGGGG CGGCTGCGGC TCGGTCGAAG CCGTCGGTCA GACCCTGTCA
GCCGGAACCA ATTGCGGCTC CTGCCGCGCC GAAATCAGGA GGATTATCGA TGCCGTTCAA
ATCCTTGCCG CAGAATAA
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| Protein sequence | MSGETKTTCP YCGVGCGVIA KVEENGTVSI KGDPDHPANF GRLCSKGSAL GETLDLDGRA
LTPTVYGERQ SWDMALDLVA DRFSRSIAEH GPDSVAFYLS GQLLTEDYYV ANKLMKGFIG
SANIDTNSRL CMASSVAGHK RAFGSDTVPG TYRDLELADL IVLVGSNMGW CHPVLYQRIA
AEKAKRPGLK VVVIDPRRTA TSDIADLHLS IRPDGDVALF NGLLAHLVEN RSIDQSYIAA
HTNGFADAFA AAAGQSLGDL MEKTGLPAMQ LRQFFQLFAA TEKTVTCYSQ GVNQSSLGTD
KVNAIINCHL ATGRIGRPGM GPFSLTGQPN AMGGREVGGL ANMLAAHMEL GNPRDRDRVQ
RFWASPTMAD KPGLKAVDMF KAVADGKIKA LWIMSTNPVV SMPDADAVKA AIAACPFVVV
SDMQADTDTA KLAHVLLPAA GWGEKSGTVT NSERRISRQR AFKPAPGEAR ADWWQMAEIG
RRMGFGKAFR YQSPADIFAE HAALSGFENT GTRDFNIGAY GAITETDYQA LAPFQWPQRQ
GEPAADSRFF ANGGFYHPDG KARFIACETA IPDRASQDFP LTLNTGRVRD HWHTMTRTAK
SARLSAHLAE PFAEIHPLDA ANLGIADAEL VEISSQTGSR VIVRALLTSR QSRGAIFVPM
HWTGETASLA RIDSLVPSRV DPVSGQPALK HVGVAAKPYA AIAYGFAVSA HKPQALDASY
WALAKAEHGW RLELAFENGQ DWENWARTAL AVPATAEMIG YSDHASGDVR LAFFDAGRLC
AALFMASQPV AVSRNWASAR LDDDFTDRRT RLALIAGRPG AGQIDPGAIV CSCFSVGINQ
ITSAVRGGCG SVEAVGQTLS AGTNCGSCRA EIRRIIDAVQ ILAAE
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