Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5865 |
Symbol | |
ID | 7380639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 879364 |
End bp | 880140 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649389 |
Product | hypothetical protein |
Protein accession | YP_002547626 |
Protein GI | 222106835 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGCTTG AATCTGTCGA TATCAATTGT GATCTGGGCG AGGCCTTTGG CCGCTGGCGG GTCGGCGATA CCGCCGATCA GGCTTTGATG GGGCTGATCA GTTCCGCCAA TATCGCCACC GGCTTTCATG CTGGCGACCC CAACCTGATG GATGAGACCG TGCGGCTGGC GGTGGAGCAT GGTGTCGGTA TCGGCGCTCA TCCCGGTTAT GATGATCTCC AGGGGTTTGG CCGCCGCAAG ATCAATGGTA CGCCGCGCGA ATTGGTCAAT GATATCGTCT ACCAGGTGGG AGCGCTGAAG GAATTCGTGC GCCGTCACGG CGCAAGTCTG CAACATGTGA AGCCGCACGG AGCGCTTTAT ATGGAAATGG CTGTTAATTC CGAACTGGCG CAGCTGTTCG TACACTATAT GCGCACCGCC AATCCCAATG CCTATGTGCT GTGCATGGCG GGTTCGGCCA CCGAAATTGC CGCGCGCGAG GCGGGACAGC CGGTGGCGCG GGAATTCTAC GCTGACCGCG ATTATGACGA AAGCGGCTCT ATCGTCTTTA CCCGCGATGT CGGGCGTCCC GATCCTGCCA CCATTGCCCG AAAAGTGCTG CGTGCCTGTC TGGAGGGCAA GGTCACGGCG GTAACGGGCA AGGATATCGA GGTGCCATTC GAGACCATCT GCTTCCATTC CGACACGCTG GGCGCTTTCG ATATCGTCCG CCATATGCGC GACGCCCTGG TCGCTGAGGG CATTCGCATT TCGCCTCTTT CAGACATTCT CAAATAA
|
Protein sequence | MALESVDINC DLGEAFGRWR VGDTADQALM GLISSANIAT GFHAGDPNLM DETVRLAVEH GVGIGAHPGY DDLQGFGRRK INGTPRELVN DIVYQVGALK EFVRRHGASL QHVKPHGALY MEMAVNSELA QLFVHYMRTA NPNAYVLCMA GSATEIAARE AGQPVAREFY ADRDYDESGS IVFTRDVGRP DPATIARKVL RACLEGKVTA VTGKDIEVPF ETICFHSDTL GAFDIVRHMR DALVAEGIRI SPLSDILK
|
| |