Gene Avi_5849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5849 
Symbol 
ID7380628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp868110 
End bp868916 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID643649378 
Producthypothetical protein 
Protein accessionYP_002547615 
Protein GI222106824 
COG category[S] Function unknown 
COG ID[COG4336] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00315108 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCCT TGAAGCATCT GGCGCATTGG GATGTCGAAC CGGCGCGTGC CGCCCGCGCC 
CGTTATCGCA GTGGAGACGT GGAACCTACA TCTGGCGTCG CCCCTGGCTT CACCCAGGCC
AATATGATCG TCCTGCCGCG CGACTGGGCC TTTGACTTCC TGCTCTATGC GCAACGCAAT
CCCAAGGCCT GCCCGGTCCT TGATGTTTCC GATCCCGGCT CGCATCTGAC GGAACTGGCC
AAAGGTGCCG ATCTGCGCAC CGATCTGCCG CTCTACCGGA TCTGGCGCGA TGGCAAGCTG
GCGGAGGAAA CACCCGACGC TACCGCCGCC TGGGCAGAGC ATCCCGATCT CGTCAGTTTT
CTGATCGGAT GCAGCTTCAC CTTTGAGACG CCGATGGTGG AGGCCGGCAT CGAGATCCGC
CACATGACAG ATAAAAGCAA TGTGCCGATG TATCTGACCA ATCAACCCTG CCGCCCGGCA
GGCCGGTTGC ATGGCAATAT GGTGGTGTCG ATGCGGCCAA TTCCTGCCTC GCGGGTGGCC
GATGCTGCGA CGATTTCCGG GCGGTTCCCG GCTGTGCATG GCGCACCGGT TCATGTCGGC
GCGCCGGAAC AGATCGGCAT TGTCGATCTG GCCAAGCCGC AATTCGGCGA TCCCGTCCGC
ATCGAGCCGG GCGAAGTGCC GGTATTCTGG GCCTGTGGCG TCACGCCGCA AGCAGCTGTA
ATGGCGTCGG GCGTCCCCTT TGCCATCACC CATGCGCCCG GCCATATGTT CATCACCGAT
ATTCTCGATT CCGCCTATCA CGCCTGA
 
Protein sequence
MIALKHLAHW DVEPARAARA RYRSGDVEPT SGVAPGFTQA NMIVLPRDWA FDFLLYAQRN 
PKACPVLDVS DPGSHLTELA KGADLRTDLP LYRIWRDGKL AEETPDATAA WAEHPDLVSF
LIGCSFTFET PMVEAGIEIR HMTDKSNVPM YLTNQPCRPA GRLHGNMVVS MRPIPASRVA
DAATISGRFP AVHGAPVHVG APEQIGIVDL AKPQFGDPVR IEPGEVPVFW ACGVTPQAAV
MASGVPFAIT HAPGHMFITD ILDSAYHA