Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5849 |
Symbol | |
ID | 7380628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 868110 |
End bp | 868916 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643649378 |
Product | hypothetical protein |
Protein accession | YP_002547615 |
Protein GI | 222106824 |
COG category | [S] Function unknown |
COG ID | [COG4336] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00315108 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCCT TGAAGCATCT GGCGCATTGG GATGTCGAAC CGGCGCGTGC CGCCCGCGCC CGTTATCGCA GTGGAGACGT GGAACCTACA TCTGGCGTCG CCCCTGGCTT CACCCAGGCC AATATGATCG TCCTGCCGCG CGACTGGGCC TTTGACTTCC TGCTCTATGC GCAACGCAAT CCCAAGGCCT GCCCGGTCCT TGATGTTTCC GATCCCGGCT CGCATCTGAC GGAACTGGCC AAAGGTGCCG ATCTGCGCAC CGATCTGCCG CTCTACCGGA TCTGGCGCGA TGGCAAGCTG GCGGAGGAAA CACCCGACGC TACCGCCGCC TGGGCAGAGC ATCCCGATCT CGTCAGTTTT CTGATCGGAT GCAGCTTCAC CTTTGAGACG CCGATGGTGG AGGCCGGCAT CGAGATCCGC CACATGACAG ATAAAAGCAA TGTGCCGATG TATCTGACCA ATCAACCCTG CCGCCCGGCA GGCCGGTTGC ATGGCAATAT GGTGGTGTCG ATGCGGCCAA TTCCTGCCTC GCGGGTGGCC GATGCTGCGA CGATTTCCGG GCGGTTCCCG GCTGTGCATG GCGCACCGGT TCATGTCGGC GCGCCGGAAC AGATCGGCAT TGTCGATCTG GCCAAGCCGC AATTCGGCGA TCCCGTCCGC ATCGAGCCGG GCGAAGTGCC GGTATTCTGG GCCTGTGGCG TCACGCCGCA AGCAGCTGTA ATGGCGTCGG GCGTCCCCTT TGCCATCACC CATGCGCCCG GCCATATGTT CATCACCGAT ATTCTCGATT CCGCCTATCA CGCCTGA
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Protein sequence | MIALKHLAHW DVEPARAARA RYRSGDVEPT SGVAPGFTQA NMIVLPRDWA FDFLLYAQRN PKACPVLDVS DPGSHLTELA KGADLRTDLP LYRIWRDGKL AEETPDATAA WAEHPDLVSF LIGCSFTFET PMVEAGIEIR HMTDKSNVPM YLTNQPCRPA GRLHGNMVVS MRPIPASRVA DAATISGRFP AVHGAPVHVG APEQIGIVDL AKPQFGDPVR IEPGEVPVFW ACGVTPQAAV MASGVPFAIT HAPGHMFITD ILDSAYHA
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