Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5782 |
Symbol | pit |
ID | 7380577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 807644 |
End bp | 809146 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649327 |
Product | phosphate permease |
Protein accession | YP_002547564 |
Protein GI | 222106773 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0306] Phosphate/sulphate permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGA TTCCAAAATA CGCCCGACCA ATGCTGGACA AGGATCTCGA CCGGCTGACC CTGCTCGAAC GCGCTGCCCA GCACGTGGCG CGTGGTGCGG CTCCTTACGG CATGGCATTG ATCTTTTTGA TCTTTGCGGC GGTTTTCGCG CTCGGCTTTG CAGCAGACCG GACGGGCTCC GCCATCATCA TCGCCGCAGC AGCGCTTGCT GGCTACATGG CGCTGAATAT CGGCGCCAAT GACGTGACCA ACAATGTCGG GGCTGCGGTG GGTGCCCGGG CCATGACGAT GACCGGCGCG CTGGTGATGG CGGCGTTTTT CGAAATTGCC GGGGCGATGA TTGCCGGAAG CGAAGTCACC GATACGATTT CCTCTGGCAT CCTGGCACCA TCTCTGGTTG GCAATCCGCA AACCTTTATC TGGATCATGA TGGCTGCTCT GTTGGCGGCA GCCCTCTGGA TCAATCTCGC CACCTGGGCC AATGCCCCGG TCTCGACGAC CCATTCCATC GTCGGCAGTG TGATGGGGGC TGCCGCATCA GCCATGGGAA CGGCCGCTGT CAATTGGCAG ACCATCGCCA CCATCACGCT CGGCTGGGTG ATTTCACCGG TGTTGGGCGG ATTGATCGCG GCCGCCATCC TGTTTCTGAT CTACGACCTC ATCGTTTACC GCCCCGACAA GATTGCCCAG GCGCGCCGTT GGGTGCCGAT TCTGATTGGA TTGATGGCGG GTTGCTTCAG TTGCTATCTC AGCCTGAAAA CCACTGGCAT GGGCTTTACG ATCATCTCGG ATCGAGCCGT TCTGTTCGGC CTGGTGATCG GCACCATTGC CTGGCTTGTG GCCCGGCCTA TCGTGAGCCA GCAGGCCGTA GGGCTGGAAA ATCGCAATCA ATCCTTGCGC AAACTGTTTC GGATGCCGCT GATCGGTGCC GCCGCTTTGC TGTCCTTCGC GCATGGCGCC AACGACGTTT CCAACGCCAT CGGCCCGCTG GCGGCGATTG TTCATACCGT CATGTCGAAT GATCTGCACA CGCGAATGAC CGCACCGCTT TGGGTGGTCA CGATAGGCGC GCTCGGCATT TCAACCGGAC TTCTGCTGTT TGGCCCAAGG CTGATCCGCC TTGTCGGCAC CAAGATCACC AAACTCAACC CGATGCGAGC CTATTGCGTC TCGCTTTCAT CCGCCATCAC TGTCATCACC GCTTCCAAAC TGGGGCTGCC GGTCAGCTCC ACCCATATTG CCATCGGTGC GGTGTTTGGC CTCGGCTTTT TCCGGGAATG GTATAATCGC CATTCAAAAC GGCGGCTGGA GTACATGCTG ATGAAGTCGG CGGAATGGCA GCGTAAAGCC CCCAAACCGT CCAATGCTGA TGAGGTGAAC CGGCGTCGCC TGGTCCGCCG CTCTCACATC CTCACCATCA TGGGCGCCTG GTTGGTAACG CTTCCGGTCT CCGCAGGGCT TGCAGCGCTG ATTTACCGGG TTATGTTCGC GCTCTTTCGA TAA
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Protein sequence | MSKIPKYARP MLDKDLDRLT LLERAAQHVA RGAAPYGMAL IFLIFAAVFA LGFAADRTGS AIIIAAAALA GYMALNIGAN DVTNNVGAAV GARAMTMTGA LVMAAFFEIA GAMIAGSEVT DTISSGILAP SLVGNPQTFI WIMMAALLAA ALWINLATWA NAPVSTTHSI VGSVMGAAAS AMGTAAVNWQ TIATITLGWV ISPVLGGLIA AAILFLIYDL IVYRPDKIAQ ARRWVPILIG LMAGCFSCYL SLKTTGMGFT IISDRAVLFG LVIGTIAWLV ARPIVSQQAV GLENRNQSLR KLFRMPLIGA AALLSFAHGA NDVSNAIGPL AAIVHTVMSN DLHTRMTAPL WVVTIGALGI STGLLLFGPR LIRLVGTKIT KLNPMRAYCV SLSSAITVIT ASKLGLPVSS THIAIGAVFG LGFFREWYNR HSKRRLEYML MKSAEWQRKA PKPSNADEVN RRRLVRRSHI LTIMGAWLVT LPVSAGLAAL IYRVMFALFR
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