| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5755 |
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| Symbol | |
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| ID | 7381636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 784606 |
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| End bp | 785883 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649308 |
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| Product | ABC transporter substrate binding protein (sugar) |
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| Protein accession | YP_002547545 |
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| Protein GI | 222106754 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.428536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAA TTCTGTCAGG CGTCAGCGCC ATCGTCTTGT CGGCGCTTGC GCTCAGCCAT
CCGGCCTTTG CCGAAACCAA AACCATCACC TTTCTGTTCA CCGATGACGA TCAGTCCTAT
GTCGAGCATA TGGCGGCGCT GAGCAAACAG TTCGAAGCTG CTCATCCTGA CGTGAAGGTC
AATTTCGTAT CTTCAGGCTA TGATGCCGTC GCCAAACAAT TGCCGGTGCA GCTTGCTGTG
GGCGAAGGCC CGGATCTGGC CAAGATCACC GATTGGCAAT TGGCACCCTT CTATCTCGAC
ATGCGGCCCT ATATGAAGGA CCCGGATGGT TACGCCAAGC TCCATGGCGA AAGCCTCAAC
CAATTGCGCC TGCCCGGCGT CAACGACCCG AAATCGATCA ATGGCTATGT CGCCTCGCAG
ACCCTGAACC TGCCCTTCGT CAACAAGACA TTGTTTGAGC AGGCGGAAGA GCCGCTGCCC
GGCCCGAAAG CGACGCTGAA AGACATTGTC GAGGCTTCCG CCCGGGTGGC GAAAAAGACC
GGCGTGCAGA TCCCCTTCAC CATGGACCGT TCCGGCCATC GGTTTTCCGG CGCGGCCTTT
TCCTATGGCT CGTCCTATGT GAAAGACGGC AAGTTCAGCT TTCCCGACGA GGCCGCCAAG
ACCTATATTG CCGATCTCTA CAACTGGACG AAGGATGGCA GCTTTCCCAA GGAAATGTGG
GGCGCTGCCG GCGGCTCGCA ATATAAGAAC ATGGGCGATG AATTCGTCAA CGGCAATGTC
GTGACCTATC TGGCCGGCAA CTGGATGGTC AATCCGTTCC AGAAGAAGAT CGGCGACGCC
TTCGAATGGA CGGCAATCAA CGCGCCCTGC GGCACCGCTG GCTGCTATGC CATGCCGGGT
GCCACCGGGA TTGTCGGCTT CAAACGCACC AAATACCCGG AAGCTGTCGC CCAATTCATC
GAATTTCTCG GCTCAGAGAA AGTCCAACGC GAGATTGCCG AAAACTACGT GATCCTGACG
GGTGCCGAAA TCGACAAGCC GCAATACAAG CTGACGGACG ACAATGCCAA GGCGTCCATG
GCCGTCTTCA ACGACAACGA AAAGAACGTG CCGCAGGAAG CGCGGATTTT TGAAAAGAAA
AAAGGCGGCT CGGCGCTTTA CCAGCAGATC GTCCAGCGCA TGAGCCAGTT GATCGTCGGC
GAATTGACGT TGCAACAAAC CTATGACGCC CTGGCCGCCG ATATCGACAA GATCAACGTG
GCAACGGCGA CGAAGTGA
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| Protein sequence | MSKILSGVSA IVLSALALSH PAFAETKTIT FLFTDDDQSY VEHMAALSKQ FEAAHPDVKV
NFVSSGYDAV AKQLPVQLAV GEGPDLAKIT DWQLAPFYLD MRPYMKDPDG YAKLHGESLN
QLRLPGVNDP KSINGYVASQ TLNLPFVNKT LFEQAEEPLP GPKATLKDIV EASARVAKKT
GVQIPFTMDR SGHRFSGAAF SYGSSYVKDG KFSFPDEAAK TYIADLYNWT KDGSFPKEMW
GAAGGSQYKN MGDEFVNGNV VTYLAGNWMV NPFQKKIGDA FEWTAINAPC GTAGCYAMPG
ATGIVGFKRT KYPEAVAQFI EFLGSEKVQR EIAENYVILT GAEIDKPQYK LTDDNAKASM
AVFNDNEKNV PQEARIFEKK KGGSALYQQI VQRMSQLIVG ELTLQQTYDA LAADIDKINV
ATATK
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