| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5736 |
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| Symbol | |
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| ID | 7381618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 762130 |
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| End bp | 763362 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649290 |
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| Product | ABC transporter, substrate-binding protein |
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| Protein accession | YP_002547527 |
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| Protein GI | 222106736 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.214535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTGCT TTAAAATGAT GCCGAGCTTG GCGCTTGGCT ATGCATTGAC CATGTCAACG
GCGTTTGCTG GTCAGATTGT GCTCAATTCC GATCAGTCGG ACCCAACGCC GAAAAAGGCG
ATGGAAGAGC TGCTGAAGGA TTTCCAGGCC GCCAATCCTG ACGTGACCGT CAAATGGAAT
AATTTCGACC ACGAGGGCTA TAAATCCGCG ATCCGCAACT TTCTGACAGC TGACGCGCCG
GATGTCGTGT CCTGGTATTC TGGCAACCGC ATGGCGCCCT TCGTCAAGGC TGGCCTGTTT
GAGGATGTCA GCGATATCTG GGCCAAGGAC GATCTCAACA ATCAGTTGAA ATCCGCCACC
AAGTCGATGG AAATCGATGG CAAGAAATGG GGCATTCCCT ATTCCACCTA TCAATGGGGT
ATTTACTACC GCAAGGATAT TTTTGCCGCT CAAGGTATCA CGCCGCCCAA GACCTGGGCC
GAGTTGCTGG CGGCCTGCGA CAAGCTGAAA AAGGCCGGTA TCACACCCTT TACCATCGGC
ACCAAGGCAC TGTGGCCGAC GGCAGGCTGG TTCGACTATC TCGACCTGCG CGTCAACGGT
TATGAATTCC ATATGGACCT GACGGCCGGA AAGGTGCCTT ACACCGACCC GCGCGTCAAA
GCCGTGTTTG CGAAATGGGA TGAACTGATC AAGCCCGGCT ATTTCATCGC CAACCATGCC
GCACTTGATT GGCAGGATGC CATGCCGCAA TTCGTGCAGG GCAAGGCGGC CATGTATTTG
ATGGGTAACT TTGCCGTGGC CCCGATGAAG GATGGCGGCT TGAAGGAAGA GCAGATCGGC
TTCCTGCAAT TCCCGGAAAT CACCCCCGGC CTGCCGCGGG CGGAAGATGC GCCGACCGAA
TCCTTCCACA TTCCCTCGGG CGCCAAGAAC AAGACGGATG CGCGCAAATT CCTGGCTTAT
CTCGCGAAGC CGGAAACCCA GACCAAGATG AACGCCACCC TTGGCCAGCT GCCGATCAAC
AACAAGTCGG AAAAATCCAG CGATCCGTTC CTCAGCGCCG GTTTCGATAT GTTGTCGAGC
GCTTACGCAT TGGCGCAGTT CTATGATCGT GACGCGCCTG CCGATATGGC CAAGGCCGGC
ATGGAAGGCT TCCAGGAGTT CATGGTCAAG CCTGACAAGG TCGATGCCAT CCTGGCCCGT
CTCGATAAGG TCCGTGCCCG CGTTTACAAA TAA
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| Protein sequence | MICFKMMPSL ALGYALTMST AFAGQIVLNS DQSDPTPKKA MEELLKDFQA ANPDVTVKWN
NFDHEGYKSA IRNFLTADAP DVVSWYSGNR MAPFVKAGLF EDVSDIWAKD DLNNQLKSAT
KSMEIDGKKW GIPYSTYQWG IYYRKDIFAA QGITPPKTWA ELLAACDKLK KAGITPFTIG
TKALWPTAGW FDYLDLRVNG YEFHMDLTAG KVPYTDPRVK AVFAKWDELI KPGYFIANHA
ALDWQDAMPQ FVQGKAAMYL MGNFAVAPMK DGGLKEEQIG FLQFPEITPG LPRAEDAPTE
SFHIPSGAKN KTDARKFLAY LAKPETQTKM NATLGQLPIN NKSEKSSDPF LSAGFDMLSS
AYALAQFYDR DAPADMAKAG MEGFQEFMVK PDKVDAILAR LDKVRARVYK
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