Gene Avi_5651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5651 
Symbol 
ID7381123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand- 
Start bp675261 
End bp675932 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content61% 
IMG OID643649217 
Producthypothetical protein 
Protein accessionYP_002547454 
Protein GI222106663 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.101784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGTGG ATATCAAGGC CCAACCCTTC GCCTTCCCTT TGAAGCTGGA CCAGGCGGCG 
CTTATTGTTA TCGACATGCA GCGCGATTTC ACCGAGCCGG GCGGCTTTGG CGAAACACTT 
GGCAATGATG TCAGCCTCGT CAGCGCCATC GTGCCGGATG TGAAACGCTT GCTGGAGGCG 
GCCCGCGCCC ACGGTCTTAC CGTGATCCAC ACGATGGAAT GCCACAGGCC CGATCTCTCC 
GACCTGCCGG ATGCCAAGCG CAATCGCGGC AATCCTACCC TGCGGATCGG TGATCCCGGA 
CCGATGGGCC GCATCCTGAT TTCAGGGGAA TACGGCACCG GCATTCTGCC GGAGCTAGCG 
CCTGTTGACG GCGAGTTGGT GATCGAAAAG CCCGGCAAGG GTGCGTTCTA TGCTACCACT 
CTCGGTGAAG AGCTTACAGC GCGCGGCATT ACCCAGTTGA TCTTTGCCGG TGTCACCACC 
GAGGTCTGCG TGCAGACCAC GATGCGCGAA GCCAATGACC GGGGCTATGA CTGCCTGCTG 
ATTGAAGAAG CCACCGCCAG CTATTTTCCG GCCTTCAAGC AATCAACCCT GGAGATGATC 
CGCGCCCAGG GCGGCATTGT CGGCTGGACC GCCCATCTCG ACCCCTTTCT GGAGGCGCTT 
GCCCATGGCT GA
 
Protein sequence
MMVDIKAQPF AFPLKLDQAA LIVIDMQRDF TEPGGFGETL GNDVSLVSAI VPDVKRLLEA 
ARAHGLTVIH TMECHRPDLS DLPDAKRNRG NPTLRIGDPG PMGRILISGE YGTGILPELA 
PVDGELVIEK PGKGAFYATT LGEELTARGI TQLIFAGVTT EVCVQTTMRE ANDRGYDCLL 
IEEATASYFP AFKQSTLEMI RAQGGIVGWT AHLDPFLEAL AHG