| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5610 |
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| Symbol | |
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| ID | 7381090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 625533 |
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| End bp | 626615 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649184 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002547421 |
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| Protein GI | 222106630 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAAC TGACCCTTGA TCGCGTTTCA AAGCAATTTC CCGGCTCCAC CGCCGTCGAT
GCTTTTTCGT TGCATGTAGA GGATGGCGAG CTGGTCTGCC TGCTCGGCCC ATCCGGTTCG
GGTAAATCGA CGCTGCTGCG GATGATTGGC GGTTTCGAAG CACCGACCAG CGGCGTGATC
CGGATCGACG GCCAGGACGT CACCCGTCTG CCGCCGGAAC GGCGACCGAC CGGCATGGTG
TTTCAAAGCC ACGCGCTCTG GACGCATATG AATGTGTTCA AGAACATCGC CTTCGGCCTG
AAGCTGCGCG GCATGGCGAG AAGCGAAATC GCTGACCGGG TCGAGGCAGC GCTGGCGATG
GTCGGGTTGA AGGATTACGG CCAGCGCCAG ACCTATCAAC TCTCGGGCGG CCAGCAGCAG
AGAGTGGCAC TTGCCCGCTC GCTGGTGCTG GAGCCGAAAA TCCTGCTGCT GGATGAACCC
TTTGCCAGCC TCGACCAGCA TTTGCGCGAA CGCCTGCGTG AGGAAGTGCG CGATATCCAG
CAGCGGCTTG GCATTACCAC CCTGTTCGTT ACCCACGGTC AGGACGAAGC TTTGGCGCTG
GCCGACCGTA TCGTCGTGAT GCGGGCTGGA CGTGCCGAGC AGATCGCCCC GCCGGACCGG
GTCTACCGCG AGCCGGAAAC CGAATTCGTC GCAGGCTTTA TCGGCCAGAT GAATTTCATT
CCCGGCATGA TGCGCCGGGG CGCATTCACC CATATTGACC TTTCCTTGGC GGTCGATGCC
GATAGCAATC CAGAGGATGG CGATGCTGTG CTGGCGGTTC GGCCTGAAGC CCTGCATCTG
TCGCCCACCG ACCGGGCGGA CGCGGCCTTT GTCTGCCGGG CCATCGATTT CGGCAGCCAT
CTCATGGTCG ATCTTCAACT CGGTGATGGC ACGAGGGTAA AGGCCATGAC CGATCCAGGA
ACCGGCTGGC AAAAAGGCGA CCGCGCCGAA TTGCAGGTCA GGGCCTTCCG GGTTTTTCGC
CACAATAAGG TGATCTGTGT GTCCCAGACC GCCGAGCGAT TAAGGAGCTT TGCCAATGTC
TGA
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| Protein sequence | MAQLTLDRVS KQFPGSTAVD AFSLHVEDGE LVCLLGPSGS GKSTLLRMIG GFEAPTSGVI
RIDGQDVTRL PPERRPTGMV FQSHALWTHM NVFKNIAFGL KLRGMARSEI ADRVEAALAM
VGLKDYGQRQ TYQLSGGQQQ RVALARSLVL EPKILLLDEP FASLDQHLRE RLREEVRDIQ
QRLGITTLFV THGQDEALAL ADRIVVMRAG RAEQIAPPDR VYREPETEFV AGFIGQMNFI
PGMMRRGAFT HIDLSLAVDA DSNPEDGDAV LAVRPEALHL SPTDRADAAF VCRAIDFGSH
LMVDLQLGDG TRVKAMTDPG TGWQKGDRAE LQVRAFRVFR HNKVICVSQT AERLRSFANV
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