| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5581 |
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| Symbol | togM |
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| ID | 7381063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 592434 |
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| End bp | 593378 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649157 |
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| Product | ABC transporter membrane spanning protein (galacturonic acid) |
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| Protein accession | YP_002547394 |
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| Protein GI | 222106603 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.512211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGGCA CCTCTGGTGC CGCGCCAGTG ATGCAGCCTA TCTCGACACC GTCGCCGTTC
AGGGCCAGTC TGGCGCGCAA CGCGCCGGGC TATCTATTTC TCCTGCCCTG GTTCATCGGC
TTTTTCGTAC TCACGCTCGG CCCGGCCCTG TTTTCCTTCT GGCTGTCGCT GACCGACTAC
AATCTGCTGC AATCGCCTAA TGTGGTCGGC CTGGACAATT ACATCCGCAT CGCCACGGCT
GACGAAAAAT TCATGTCCTC CATGCGGGTG ACGCTGGTCT ATGTGGTGCT GTCGGTGCCG
CTGAAACTGA CCTTCGCCCT GCTGGTTGCC CTGCTGCTCA ACAAGGGCAT TCGCGGCCTA
CCGCTCTACC GGGCGGTTTT CTACCTGCCA TCGCTTCTGG GCTCCAGCGT CGCCATCGCG
GTGGTTTGGC GGCAATTGTT CGATGGCGAC GGGGCGATCA ACGTGCTGCT TTGGAATACC
TTCGGCATCG AAGGGCCAAG CTGGATCTCC AATCCCGATT ACTCCCTCTA TACGCTGGTC
ATCCTGGCTG TCTGGCAATT CGGCTCGCCG ATGATTATCT TTCTGGCTGG CCTACGGCAG
ATCCCGGTTG ATATGTATGA GGCAGCCAGC CTGGATGGCG CTTCCAAAGT GCGGATGTTC
TTCAAGATCA CCCTGCCTTT GCTGACGCCG GTGATCTTCT TCAATGCCGT GGTGCAGACC
ATCGATGCCT TCAAGGCCTT TACGCCCGCC TATGTGATCT CGTCGGGCAC CGGTGGCCCG
ATTGATTCCA CGCTGTTTTA CACGCTCTAC CTTTACCAGG AAGCCTTTGG CTATTTCCGG
ATGGGGTATG CGGCAGCGCT TGCCTGGATC CTCGTGATCA TCATCGCGCT GTTCACGGCC
TTTTCCTTCC TGTCCTCGCG CTATTGGGTG CATTACGATG ACTGA
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| Protein sequence | MAGTSGAAPV MQPISTPSPF RASLARNAPG YLFLLPWFIG FFVLTLGPAL FSFWLSLTDY
NLLQSPNVVG LDNYIRIATA DEKFMSSMRV TLVYVVLSVP LKLTFALLVA LLLNKGIRGL
PLYRAVFYLP SLLGSSVAIA VVWRQLFDGD GAINVLLWNT FGIEGPSWIS NPDYSLYTLV
ILAVWQFGSP MIIFLAGLRQ IPVDMYEAAS LDGASKVRMF FKITLPLLTP VIFFNAVVQT
IDAFKAFTPA YVISSGTGGP IDSTLFYTLY LYQEAFGYFR MGYAAALAWI LVIIIALFTA
FSFLSSRYWV HYDD
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