| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5552 |
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| Symbol | glnH |
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| ID | 7381460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 550073 |
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| End bp | 550825 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649132 |
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| Product | ABC transporter substrate binding protein (glutamine) |
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| Protein accession | YP_002547369 |
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| Protein GI | 222106578 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.21864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGGCAGC AGGCTGTTGC AGCCGACAAT CCTTACGGGC TGATTGACCC GAAGGTCATC
AGTGTCGGCA CCATGGGCGA TTCCAAGCCC TATACATTCA TCACCTCCGA TGGCCAGTTC
ACCGGCTTCG ACATTGAACT CTTTCTCAAT GTTGCGGAAC GCATGGGCTT CAAGAAAGAT
CAGGTTGTCT TTACCGGGCA GGAATTCTCA GCCTTGATGC CGTCTGTTGC CAATGGCCGG
TTCGACGTGG CCGTCGCGGC CATTGGCACC ACCGAGGCCC GCAAGAAGAC CGTTGATTTT
TCGGATGGTT ATCTGGCCGG TTATCTCTCG GTGCTGACTC CAGATGCGAA GATTACCGAT
GCCGCGGGCC TGAAGGGCAA GCGCCTGGGC GTGGTGCAAG GCACGTTGCA GGAAATCTAT
GCGACCAAGA ATTTCAAGGA CACCGATCTC GTCAAATTTC CCGACAACAA CTCCGCCGTC
TCGGCCCTGA ACAATGGCAC GGTCGATGCC CATTTCCTCG ATTATGAGGC TGCCAAGGAC
TATACGGATC GTTTCAAGGC ACTGAAAATT GCCGTCAACA TTCCAAGCTT CGATGCGCCT
GCGGGTTTTG TGATCCGCAA GGGCAATGAT GGGCTGCGTG AGGCCTTCAA CAAGGGCCTG
CACGCCGCCA TGCAGGACGG AACCTGGAAG AAGCTCTACG AAAAATGGTT CCCCGGCTCG
CCGATGCCTG CCGACTACCT TCCCAAGCCT TGA
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| Protein sequence | MGQQAVAADN PYGLIDPKVI SVGTMGDSKP YTFITSDGQF TGFDIELFLN VAERMGFKKD
QVVFTGQEFS ALMPSVANGR FDVAVAAIGT TEARKKTVDF SDGYLAGYLS VLTPDAKITD
AAGLKGKRLG VVQGTLQEIY ATKNFKDTDL VKFPDNNSAV SALNNGTVDA HFLDYEAAKD
YTDRFKALKI AVNIPSFDAP AGFVIRKGND GLREAFNKGL HAAMQDGTWK KLYEKWFPGS
PMPADYLPKP
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