| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5541 |
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| Symbol | |
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| ID | 7381453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 539787 |
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| End bp | 540191 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649125 |
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| Product | response regulator |
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| Protein accession | YP_002547362 |
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| Protein GI | 222106571 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGTCG AAGACGAGAC CCTGCTTGCG CTTGAACTTG AAGCGGAAGT GGAGGCAGCT
GGCCACACTG TCGTCGGACA GGCGATGAGC CGTGCTGAGG CTATTGAAAT CATCGACCGG
GAAAAACCGG ACTTCGCCTT TGTCGACGTT CATCTTCTCG ATGGGCCAAC CGGGATCGAG
GTTGGGCGGC ATCTGACTGA GCGGGGTATT CCCTATGTTT TCGTCACGGG CAATCTTCGG
CGGATACCGC CGGATTTCGT CGGTGCGGTG GGTGCTATTG AAAAGCCCTA TACCATGAAT
GGCTTGCAGA ACGCCCTGGA TTATATCGGC AAGCGGCTGC GGGGCGAGGC TAACGTGCAG
GCCCCGCCAA GCCTGGTGGT GGCGCCGGAG ACCCAGCACG GTTGA
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| Protein sequence | MIVEDETLLA LELEAEVEAA GHTVVGQAMS RAEAIEIIDR EKPDFAFVDV HLLDGPTGIE
VGRHLTERGI PYVFVTGNLR RIPPDFVGAV GAIEKPYTMN GLQNALDYIG KRLRGEANVQ
APPSLVVAPE TQHG
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