Gene Avi_5526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5526 
Symbol 
ID7381441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp523297 
End bp523650 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content59% 
IMG OID643649113 
ProductPermeases of the drug/metabolite transporter (DMT) superfamily 
Protein accessionYP_002547350 
Protein GI222106559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.625199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAG GGCTTGATCT GTCGATGTTG GCGCTGATCC TGTTCTGCAT CCTGACGGAG 
ACAGGCCGTG AGATCTGCTT CAAAAAAGGG GCAGGCGCGG GCGATGCCAG ACAGATGGTG
CTACGGCCTG TCGTCTGGGC CGGGATCTGC TTCTGGCTGA TCGAACTGCT GGCCTGGAGC
CGGGTGCTGG CCAGTGTTTC GCTGTCCGTC GCCTTTCCGA TCATGGCGAT GAGCTATGCC
ACCATCACGA TTGCCGGTGC GGTGATCTTC AAGGAATCCA TCAACCTTCG CCATGCCGTC
GGGGTCGCGC TTGTGACTGC CGGTGTGGTC TGTGTCGGAG CAACAGGACT ATGA
 
Protein sequence
MKQGLDLSML ALILFCILTE TGREICFKKG AGAGDARQMV LRPVVWAGIC FWLIELLAWS 
RVLASVSLSV AFPIMAMSYA TITIAGAVIF KESINLRHAV GVALVTAGVV CVGATGL