Gene Avi_5490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_5490 
Symbol 
ID7381410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp487377 
End bp488507 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content60% 
IMG OID643649082 
Producthypothetical protein 
Protein accessionYP_002547319 
Protein GI222106528 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.263569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCGG GTATCAAGAA GATCCTGATT ATCGGCGGTG GTTTTTCGGG AATGACTGCG 
GCACTTCAGC TGTCGCGAGA GGGGTTTGAG GTCGATCTCG TGGAGATCGA TCCAGGATGG
CGCTCCTATG GGGCAGGCAT CAGCCTGCAC GGCTCGACGC TCAGGGTGCT GCGCCAACTC
GGCCTGCTGG ATCGCTTCAT GGAAGAGGGT TATGCCAGTG ACGGCGTGCA CTTACGGGGG
CCGGATGATG CCGTGCTGTT CACACTGCCT ACCCCCCGGG TGGCGGGCGA CGATATTCCC
GGCGGCGGCG GCATCATGCG CCCGGCGCTT GCCAAAATCC TGTCGGAGGC GGTGCGGGCT
TCCACGACCA AGGTTCGGCT AGGCGTGACA TTTACCGAGA TCGTCCAGAG CGAAGACGGA
GCACAGGTCA GCTTTAGCGA CGGCAGTTCA GACCGGTTCG ATCTCGTCAT CGGGGCGGAC
GGGCTGTTTT CCGCTGTCCG TTCCAAGACG TTTCCTCATG CCCCAAAGCC CCGTTTCATC
GGCCAGTCGG TCTGGCGCGC TGTTCTGCCA AGACCGGAGG AGCTGGAAAC CATCACCATG
TGGATGGGTC CGAAACTCAA GGTCGGCTTG AATGGCGTCA ACAAAACCCA AGCCTATCTA
TTCCTGACCG AAGACCGCCC CACCAATAAC TTCGTGGCTC CGGAGCTTTT CGTCGATACC
CTGCGCGGCT TGATGGAGCG CTTCAGCTCG CCAATCATCC AAGGAATTGC CAAGCAATTG
TCAGCTGAGC ACCAGATCAT TTACCGGCCA CTGGAGCAGA TGTTGCTGCC GCGTCCTTGG
TTTCAGGGAC GGGTGGTGCT GATCGGCGAC GCCGTTCATG CCACGACACC GCATCTGGCC
GCCGGTGCCT GTATCGGTAT CGAGGATGCC ATGGTGCTGG CCGAGGAATT GGTGAGGGGC
AGCGATGTCG ATGGCGCGCT TGCCGCTTTC GAGGCAAGGC GCTGGGAGCG GTGTCGGATG
GTGGTCGAGA ATTCGGGCCG TCTGGCCGAT ATCGAGATCC ATGGCGGCAG CCGTGAAGAG
CACGCTTCGA TCATGACAGT TTCGATGAAA ACCCTGGCGG AAGCGATCTG A
 
Protein sequence
MNSGIKKILI IGGGFSGMTA ALQLSREGFE VDLVEIDPGW RSYGAGISLH GSTLRVLRQL 
GLLDRFMEEG YASDGVHLRG PDDAVLFTLP TPRVAGDDIP GGGGIMRPAL AKILSEAVRA
STTKVRLGVT FTEIVQSEDG AQVSFSDGSS DRFDLVIGAD GLFSAVRSKT FPHAPKPRFI
GQSVWRAVLP RPEELETITM WMGPKLKVGL NGVNKTQAYL FLTEDRPTNN FVAPELFVDT
LRGLMERFSS PIIQGIAKQL SAEHQIIYRP LEQMLLPRPW FQGRVVLIGD AVHATTPHLA
AGACIGIEDA MVLAEELVRG SDVDGALAAF EARRWERCRM VVENSGRLAD IEIHGGSREE
HASIMTVSMK TLAEAI