Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5471 |
Symbol | ssuA |
ID | 7381561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 470916 |
End bp | 471881 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649068 |
Product | ABC transporter substrate binding protein (aliphatic sulfonate) |
Protein accession | YP_002547305 |
Protein GI | 222106514 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAACC GCAGACAGAC CCTTGGCTTG CTTGGCGCTG CCAGCACCAT CCTCGCCTTG CCGGCAATCC GTACCGCCCA GGCGGCAACC ACGACATTGC GGATCGGCTG GCAGAAGAAT GGTGTGCTGG CGCTGGCCAA GCGCACGGGC GCGCTGGAAA AGCGTTTGGC TACACGCGGC GTCACCGTGA CCTGGGCTGA ATTTACCTCA GGCCCGCCGC TTCTGGAAGC GCTGGGCGCC GGTGCGCTCG ACTTCGGTCC GACAGGCGAT GTGCCGCCAC TGTTTGCCCA GGCGGCGGGC GGCAATCTCC TTTATGTCGG CACGTACAAG GGAGCACCCT CCGGCACGGC ATTGCTTGTT CACAAGGATT CACCGATCCA GTCGATTGCC GATCTCAAGG GCAAGAAGCT TGCCTTCAAG CGTGGTTCGA GCGCCCACAA TTTCGTGGTC AAGGCGCTGA AAACGGCCGG ATTGACGCGA TCAGATGTCA AGGCTGCGGA TCTGTCGCCT GCCGATGCGG GGGCGGCATT CAAATCCGGA AATGTCGATG CCTGGGCAAT CTGGGACCCT TATTTTGCGG TGGCCGAGAC CGATCCTAAT GCCAGGGTGT TGACGACCGC CAGCGGTATT GTCGATAGCT GGAGCTTCTA TTTCGGCAAT GGTGATTTCA CCAGTAAAAA CCCGGAGGTG ATCACCGATG TGATCGATGA ATTGCGCAAG ACCGGCGTTT GGGCGCAGAG CCATCTGGAT GAGACGATTA CAGCGCTCGC CGAAATCACT GGCGTGCCGC GCGACACGAC AAAGACCGTG CTGACCCGGC CCGGCGCCGA TCTCGGCAGC GTGTCTACCC TGAACGATGA AGCCATCGCC TATCAGCAGG CCTTGGCCGA CGAGTTTCAC GCCCTGCAAA TTCTGCCGAA GCCTTTGAAG ATCGCCGAGA TCGTCTGGCG CCCGAAGGCC AGCTGA
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Protein sequence | MINRRQTLGL LGAASTILAL PAIRTAQAAT TTLRIGWQKN GVLALAKRTG ALEKRLATRG VTVTWAEFTS GPPLLEALGA GALDFGPTGD VPPLFAQAAG GNLLYVGTYK GAPSGTALLV HKDSPIQSIA DLKGKKLAFK RGSSAHNFVV KALKTAGLTR SDVKAADLSP ADAGAAFKSG NVDAWAIWDP YFAVAETDPN ARVLTTASGI VDSWSFYFGN GDFTSKNPEV ITDVIDELRK TGVWAQSHLD ETITALAEIT GVPRDTTKTV LTRPGADLGS VSTLNDEAIA YQQALADEFH ALQILPKPLK IAEIVWRPKA S
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