| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5462 |
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| Symbol | treY |
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| ID | 7381554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 461742 |
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| End bp | 464273 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649061 |
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| Product | malto-oligosyltrehalose synthase |
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| Protein accession | YP_002547298 |
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| Protein GI | 222106507 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC CAACAGCGAC CTACCGCCTG CAATTTCGAA ACGGCATAAC ATTCGATCAT
GCTATCGATC TTATTCCCCA TTTGAAATCG ATGAGCATCA GCCATCTCTA TGCATCCCCG
ATCTTCACGG CCACCACTGG CTCCACCCAC GGCTATGATG TGGTGGATGC CAACGAAATC
GACCCGGTTA TTGGCGGGAA AGCCGGTTTC GATCGGATGT GCGCGGCGCT TGCAAAGGCG
GATATTGGTC TGATCCTCGA TATCGTTCCC AACCATATGG CGGCTTCGGT TGAAAATGCC
TGGTGGTACG ACGTGCTGCG CAATGGCAGC CGCAGCGCCT ATGCCGGACA TTTCGATATT
GACTGGAGCC GGAAGCTGAC CTTGCCGGTG CTTGGCAAGA CCCTTGAGGA TGCCCTTGGC
GATGGTGAGC TGACGATCAT ACGGGATGAT AACGCTGACA GGTTCAGCCT TGCCTATTTC
GAGACGCATA TTCCCTTGAG CGATGAAAGC ATCGAGCAGG CACTTGTCTC TGAAAAGACC
GACCGGGCGA CCTTGGTCGA GGTGCTCGCC TCGCCTGAAA AAGTCAGGGC GTTACTCGAT
GCCCAGCATT GGCAGCTTCA ACACTGGAAA CAGGCTGCGG AAAGCCTGAG TTATCGCCGC
TTTTTCGAAG TCACCGGCCT TGTGGGTGTC TGCGTGGAAA AACCGCAGGT GTTTGAAGAA
AGCCACCAGC TGATCCTTGA TCTGGTCCGG TCAGGGCAGG TTCAGGGATT GCGGATCGAT
CATGTCGATG GGCTGGCCGA TCCGGCTGGT TATCTCGACC GCCTGCGCGA GGCGGCGGGG
CCGCAGACCT ATATCACTGT CGAGAAAATT CTGGGGGCAG GCGAGGTGAT TGCGTCGAGC
TGGCCGGTGT CCGGCACGAC GGGCTATGAG TTCATCACCG CCCTGTCGCA GCTCTACATC
GATGGCGACG GGCTTGAACG CCTTCAGCAG GCCTATAACG ACACCGACGC AGGCGCTGCG
GACTATGTCA AAGGCCTGCG GGATGCCAAG ACCCGGATGG TTCAACGCAA TTTCAAGGGT
GAAGTCACCC GGCTGGTGGT GCTAGCGCAA TCGATTGGCA CCGGCCACGG CGAGGACGAG
TTGCGCAAGG CGATACAGGA ATTGCTGATC GCTTTCCCAG TCTACCGGAC CTATGGCTAT
CACGGTGGCC TTGATGCGCA GGACAAAATC GTCCTGGAAC ACGTCGTTGC GCAGGCTCGG
CTCTGGGGCG TGGACGAGGG AGCGCTTGGT GTTATCGAAC GCCTGTTGCT CGGCGGGTTC
GAGGCGGAGG CGGCAGATGA GTTCCGCACC CGTTTCCAGC AGTTGAGCGG TCCTGTCATG
GCTAAGGCGT TGGAAGATAC GCTGTTCTAC CGCTACAACC GCCTGATTGC CGCAAACGAG
GTTGGTGGTG AACCAGCCCA TCCGCCGGGC GGTGTGAGCG CCTTCCACGC CGCAATGGCT
GAGCGCATGC AGACCCAGCC GCATGGTCTC ACGGCAAGCT CAACCCATGA TACCAAGCGC
GGGGAGGATG CGCGCGCCCG TCTCTACACC CTGTCGGAAG GGGCGGATGC CTGGATCGAC
GGTGTGAGCC GCTGGCGCCA GATGCATCGC GGCAATCTCA CCTCTTTACT AGACGGTCCC
GCGCCCGATC CGAATGTGGA GTGGATGCTG TACCAGGCTT TGGCGGGGAT CTGGCTCGCG
CCGACCGAAG CTACCGATCC TGCCACGCTG ACCGACCGCT TTCTGGCCTA TACTGAAAAA
GCGCTTCGGG AGGCCAAGGT GCGAACGGAC TGGGCCGAGC CAAACGAGGC TTTCGAACAG
GCGGTGCGCT CCTATGCCGA ACAGTTGGTG TCACCGGAAA ACCGAAGCTT CCTGACGGAT
TTCAGCGATA CGCTTCAGCC CTTTATGGCG GCGGGCGAGG TCAACAGCCT CTCCCAGACG
CTGATCAAGC TCACGGCGCC GGGCGTGCCG GATATTTATC AGGGAACCGA GGGCAAAGAC
GACAGTCTGG TCGATCCGGA CAATCGTCGC ATCATCGATT ATCAGGCGCT GGCAGCCGAG
GTGAGTGCGC CCGCAAATGA GGGCCCGGTC TCTTTCATTC AGCGCAAGCA AAGGCTGATC
CGGGAGGTGC TCGCCCTTCG TAGCCGCCAT GCGAGCCTGT TCAATAACGG TGATTACGTG
CCGGTGGAGG TCACTGGTCA TGCCCGGGAT CACGTCATCG CTTTCGCTCG GGTACAAGGC
AATGATATCG CGTTGACCAT CGCGCCAAGA TTGGTGTTTG GCCGGATCGA TCCTGAGACG
GCAAGGGTTG CTGCGGCGTT CTGGGCGGAT ACCAGGATTG TTTGGCCTGA GAGCGTGCAG
GGACCGTTGC ACACTATTCT GTCAGGCCGG TCGTTCAATC GTGAACAGAT GCTGGTGTCA
GATCTGCTCG ACGGTAACGA TATCGCCCTG CTGGTGACGC CTTCACTCAC TGCAACCGAC
ATTCAGCGAT AA
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| Protein sequence | MTIPTATYRL QFRNGITFDH AIDLIPHLKS MSISHLYASP IFTATTGSTH GYDVVDANEI
DPVIGGKAGF DRMCAALAKA DIGLILDIVP NHMAASVENA WWYDVLRNGS RSAYAGHFDI
DWSRKLTLPV LGKTLEDALG DGELTIIRDD NADRFSLAYF ETHIPLSDES IEQALVSEKT
DRATLVEVLA SPEKVRALLD AQHWQLQHWK QAAESLSYRR FFEVTGLVGV CVEKPQVFEE
SHQLILDLVR SGQVQGLRID HVDGLADPAG YLDRLREAAG PQTYITVEKI LGAGEVIASS
WPVSGTTGYE FITALSQLYI DGDGLERLQQ AYNDTDAGAA DYVKGLRDAK TRMVQRNFKG
EVTRLVVLAQ SIGTGHGEDE LRKAIQELLI AFPVYRTYGY HGGLDAQDKI VLEHVVAQAR
LWGVDEGALG VIERLLLGGF EAEAADEFRT RFQQLSGPVM AKALEDTLFY RYNRLIAANE
VGGEPAHPPG GVSAFHAAMA ERMQTQPHGL TASSTHDTKR GEDARARLYT LSEGADAWID
GVSRWRQMHR GNLTSLLDGP APDPNVEWML YQALAGIWLA PTEATDPATL TDRFLAYTEK
ALREAKVRTD WAEPNEAFEQ AVRSYAEQLV SPENRSFLTD FSDTLQPFMA AGEVNSLSQT
LIKLTAPGVP DIYQGTEGKD DSLVDPDNRR IIDYQALAAE VSAPANEGPV SFIQRKQRLI
REVLALRSRH ASLFNNGDYV PVEVTGHARD HVIAFARVQG NDIALTIAPR LVFGRIDPET
ARVAAAFWAD TRIVWPESVQ GPLHTILSGR SFNREQMLVS DLLDGNDIAL LVTPSLTATD
IQR
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