| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5406 |
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| Symbol | |
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| ID | 7381507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 405455 |
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| End bp | 406210 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649015 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002547252 |
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| Protein GI | 222106461 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.408693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCCTGC CGGGCCTTGC AGCCCTTGTC TCGCTGGCGG GTGTGATTGT GTTTTGGGAA
TTGGCCGTGC GGCTGTTTGC CGTCCCGTCC TATCTCCTGC CGTCGCCATC GTCGATCTTC
AATGCGTTTT CGTCCATCGG GATCGACCGC TGGGGCCTGC ATCTGTGGGC GACACTGCGG
GTGGCGATGA TCGGCTATGT GTTGTCGATT GCCATCGCCA TTCCGCTGGC CATCGTCATG
ATGCGCTCGC CGCTTCTGTC AAAGACGCTT TATCCGTTGC TGGTCGTCAT CCAGTCAACG
CCGGTTGTGG CAGTGGCACC AATCATCATC GTCGTGCTGG GGGCGGGCGA TGCGCCACGG
GTGGTGATCA CCTGTCTCAT CACCTTCTTT CCGCTGGTCG TTTCGACGGC GACCGGGCTT
GCGGCAACGC CGCCGGAATT GATCGAACTG TCCAGAAGCC TACGAGCGCC CGCCTTTCGG
GAGATCACCC AGATCAGGCT GCCCTTTGCC GTGCCTTACA TCTTTTCGGC GCTGAAAATC
TCGATCACGC TGGCGGTGAT TGGCGCTGTG GTTGCGGAAT TCTGCGCATC GGAGGCGGGT
GTCGGCTATT TCATCCAGTT TTCGACATCG CTGTTCAAAC TGCCCCAGGC CTGGGCCGGA
TTGTTCGTGC TGGCAGCCTT GTCGCTCATC CTGTTTCAGG CGGTGCTGCT TGTACAGAAA
TTGCTGTTTC CCTGGAGCCT GCCGAAGAAC AGCTGA
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| Protein sequence | MGLPGLAALV SLAGVIVFWE LAVRLFAVPS YLLPSPSSIF NAFSSIGIDR WGLHLWATLR
VAMIGYVLSI AIAIPLAIVM MRSPLLSKTL YPLLVVIQST PVVAVAPIII VVLGAGDAPR
VVITCLITFF PLVVSTATGL AATPPELIEL SRSLRAPAFR EITQIRLPFA VPYIFSALKI
SITLAVIGAV VAEFCASEAG VGYFIQFSTS LFKLPQAWAG LFVLAALSLI LFQAVLLVQK
LLFPWSLPKN S
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