Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5392 |
Symbol | cysT |
ID | 7381496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 393341 |
End bp | 394198 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649004 |
Product | sulfate ABC transporter permease protein CysT |
Protein accession | YP_002547241 |
Protein GI | 222106450 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0555] ABC-type sulfate transport system, permease component |
TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein [TIGR02139] sulfate ABC transporter, permease protein CysT |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.783844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCATA GTCCTGTTCA AGGCAGGTGG CAATTCCGTC AGCCGAGCGT TCTTCCCGGA TTCGGGTTGA CGTTCGGCTT TACGGTGTTT TACCTCGCCC TCATCGTTCT CATTCCCCTG TCCGGTCTGG TCTGGCGTTC CGCCGAATTG GGCTGGGCGG ATTTCTGGCA TATCGCGTCC GACCGCAGGA CGCTTGGCGC CCTGAAGGTC AGCTTCGGCT CGGCCATCCT GGCGGCTATC CTCAATGTCG TATTCGGCGT GCTGGTCGCC TGGGTGCTGG TGCGCTACAA TTTCTGGGGG CGGCGGATCA TCGACGCGAT GGTCGATCTG CCGTTTGCGC TGCCGACCGC CGTTGCCGGT ATCGCCCTTG CCTCGCTCTA CGCGCCAAAC GGTTGGATCG GCTCGCTTCT TGCGCCGCTT GGCCTGAAAG TCGCCTATAC CCAGGCTGGC ATCGTCGTTG CCATGGTGTT TATCGGCCTG CCCTTCGTGG TGCGCACCGT GCAACCGGTC ATGGAAGAAA TCGACCGCGA CGTGGAGGAA GCCGCGGCAA CGCTGGGTGC CAGCCGCTTT GCAACAATAT TCAAAGTGCT GCTGCCGGGT CTGGCACCGG CCATCATGAC CGGCTTTGCC CTTGCACTGG CGCGCGGGGT CGGGGAATAT GGATCGGTGA TCTTCGTGGC CGGCAATGTC CCCTATGTCT CGGAAATCGC ACCACTTCTC ATCGTCATCC GGCTGGAGGA GTTCAACTAT GCGGGCGCAA CCGCCGTCGG TGCGGTAATG CTGGCGATTT CCTTTGCCAT GCTTCTGTTG ATCAATCTCA TTCAGGCCGC AAGCCGGAGA AAATATGGCA ATGACTGA
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Protein sequence | MAHSPVQGRW QFRQPSVLPG FGLTFGFTVF YLALIVLIPL SGLVWRSAEL GWADFWHIAS DRRTLGALKV SFGSAILAAI LNVVFGVLVA WVLVRYNFWG RRIIDAMVDL PFALPTAVAG IALASLYAPN GWIGSLLAPL GLKVAYTQAG IVVAMVFIGL PFVVRTVQPV MEEIDRDVEE AAATLGASRF ATIFKVLLPG LAPAIMTGFA LALARGVGEY GSVIFVAGNV PYVSEIAPLL IVIRLEEFNY AGATAVGAVM LAISFAMLLL INLIQAASRR KYGND
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