Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5352 |
Symbol | |
ID | 7380708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 351928 |
End bp | 352980 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643648969 |
Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
Protein accession | YP_002547206 |
Protein GI | 222106415 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTCGA TCCGCGGCTC CATACGTGAG GACAGCATGA CCCGGCCTAT TCTGGAGATC CGCGATCTCA CCACCCATTT CCAAACCCGA TCCGGCACCG CCCGCGCGGT CGATAAGGTC TCGTTGTCGC TTGAAGCGGG GCAAACGCTC TGCGTTGTCG GCGAGAGCGG CTGCGGCAAA TCGATCACCG CGCTGAGCAT CATGGGGCTG GTGCCCTATC CCGGCAAAAT CATCGGTGGC GAAGTGCTGC TGGATGGGGC CGATCTGCGC AGCATGTCGC CGATGGACCT CAGCAAGGTG CGCGGCAACC GGATTTCGAT GATTTTTCAG GACCCTTCCT CCTCGCTCAA TCCGGTTCAC ACCGTGGGGC GGCAGATTGC CGAGGCTTAC CGTCTGCACA AAAACATGGG CAAGCGCGAA GCCGAGGATG CAGCAATCGC CATGCTGAAA GCCGTCGGCA TTCCCGATCC CCAACGACGC ATGAAGGCCT ATCCGCATGA AATGTCCGGT GGCATGGCGC AGCGGGTGAT GATTGCCATG GCGCTGGCCT GCCAGCCGGA AGTACTGATT GCCGACGAGC CGACCACCGC GCTGGATGTG ACCATTCAGG CGCAAATTCT GGATTTGATG CGCGATTTGC AGCGCGATTT CGGCACCGCC ATCATTCTGA TCACCCATGA TCTCGGCGTG GTCGCCGAAA TGGCCGATCA TGTCGCGGTG ATGTATGCGG GCCAAGTGGT AGAGCTTGCC GATGTGAGAA CCCTGTTCAA ATCGCCCAAG CATCCCTACA CGCAAGCCTT GCTGCGCTCG GTGCCGGTGC TGGGCGAATC TCCTGATATG CTGGAAGTCA TCGATGGTCG TGTGCCGCAA TTAACCCACT TGCCACAGGG CTGTCTGTTC GCGCCGCGTT GCACAGCCCG GCGTGAGGCC AATGAACCGC GCTGTCTGAC CGAAGTTCCA GCGCTGACCG AAATCCACAA GGCCCATCAC TGTCGATGCT GGCTGAACGA ACCGGCGACG CTTGCCGGTG AACAAGAGGT TCAGCCCGCA TGA
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Protein sequence | MPSIRGSIRE DSMTRPILEI RDLTTHFQTR SGTARAVDKV SLSLEAGQTL CVVGESGCGK SITALSIMGL VPYPGKIIGG EVLLDGADLR SMSPMDLSKV RGNRISMIFQ DPSSSLNPVH TVGRQIAEAY RLHKNMGKRE AEDAAIAMLK AVGIPDPQRR MKAYPHEMSG GMAQRVMIAM ALACQPEVLI ADEPTTALDV TIQAQILDLM RDLQRDFGTA IILITHDLGV VAEMADHVAV MYAGQVVELA DVRTLFKSPK HPYTQALLRS VPVLGESPDM LEVIDGRVPQ LTHLPQGCLF APRCTARREA NEPRCLTEVP ALTEIHKAHH CRCWLNEPAT LAGEQEVQPA
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