| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5308 |
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| Symbol | |
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| ID | 7380672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 309370 |
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| End bp | 310140 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648934 |
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| Product | dehydrogenase |
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| Protein accession | YP_002547171 |
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| Protein GI | 222106380 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.19539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACA GATTGAAAGA CAAGGTCGCA CTGGTGATCG GTGCATCTCG CGGCATCGGC
AAAGCGATTG CCGTGCGGTT CAAGGAGGAG GGCGCGAAAC TCGTGCTCGC CGATTTCAAT
GCGGAGGAAG GCAAGGCCGC AGCCGACGAA CTCGGCATCG ATTTTATCCG CACCGATATC
GCTAGCATGC AGGATGCGGT TGCTGCCGTG GAATTCACTG TTGAACGCCA TGGTCGGATC
GATATCATCG TACAGAATGC TGGCATCTAT CCCTGGCAAT TGATCGAGCA TACCAGTCCG
GATGATTGGG ATCAGGTGAT GGCGGTCAAT CTGCGGGGCT GTTTCAATGC CGCGCGGGCG
GCACTTGCGC CGATGAAGAC GCAAGGATCG GGGCGCATTC TCTTTACGTC ATCGATCACC
GGTCCACATG TCACCAGTCC GGGCCATGGC CATTATGCGG CAAGCAAGGC TGGTATCAAC
GGGTTCATTC GTTCGGCCGC ACTGGAATTT TCGTCCTATG GCATCAATGT GAATGGGGTC
GAGCCGGGCA ACATCATGAC GGAGGCCATC CAACTGCATC GAAGCGCCGC CTTCATCAAG
AATATGGAGG ATGCGATTCC ACTCGCGCGT CTTGGGTCCC CTCGGGATGT GGCCAATGCC
TTCCTGTTCC TCGCCTCTGA TGATGCGAGC TACGTGACCG GCACGACCAT CGTTGTCGAT
GGGGGACAAC TTCTGCCTGA GGGTGCCGAC TTCAGGATCT TGCCATCCTG A
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| Protein sequence | MTDRLKDKVA LVIGASRGIG KAIAVRFKEE GAKLVLADFN AEEGKAAADE LGIDFIRTDI
ASMQDAVAAV EFTVERHGRI DIIVQNAGIY PWQLIEHTSP DDWDQVMAVN LRGCFNAARA
ALAPMKTQGS GRILFTSSIT GPHVTSPGHG HYAASKAGIN GFIRSAALEF SSYGINVNGV
EPGNIMTEAI QLHRSAAFIK NMEDAIPLAR LGSPRDVANA FLFLASDDAS YVTGTTIVVD
GGQLLPEGAD FRILPS
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