| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5305 |
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| Symbol | |
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| ID | 7380670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 307276 |
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| End bp | 308316 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648932 |
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| Product | ABC transporter, binding protein |
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| Protein accession | YP_002547169 |
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| Protein GI | 222106378 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.325241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAC TATTGACAGT CTTGCTGGGC ATTCTGATGC TCAACCTCGC GGCGTGGACA
TCGGCTGCCG CCCAAACAAA AGGGATGGTT TATTACCTCG TTCCGACCTT GCTGGATGAA
TTCCAGACCG GCTCGGTGAA CGCGCTGAGC ATGTTCCTGG GGCAGGTCGG CTATGAGATG
AAAACACTCA ATGCCGACAA CAAGACAGAT GCCCAACAAT CGCAGATGAA TGACGTAATT
GCGTTGAAGC CCGCGGCGAT CATCCTGGCC GCAGTAGACT TCAACGCGCT CAAGCCGTCG
ATTGAGGCCG CGCGCGCCGC AGGCATTCCT GTCGTTGAAT TCGACCGGCA GATCACATCG
ACACCCTCGG ATTTCACCTC GGTTGCGGGC ACGGTCGAGA TTGGCCATAT CGCCGGTGAC
CACGCGATCA GCTTGCTCAA GGGCAAAAAT GGGGATGTAA AAGGGAAGAT CCTTCAGGTT
CCCGGCGATC CCGGCGATCC CTACACGCTC GATATCCAGA AGGGTTTTGA GGAGAAAATC
AAGGCCTTTC CCGGCGTCAA AATCATCTCG GTCCCCGCCG TGCAGTGGGA AGCCAGTGCC
GCCGGAACAA TCGTTTCCGA CCAGATGCTT GCCAATCCTG ACATCGATCT GATCTTCCTG
CATGCTGCCC ATCTTTCGGT CGCTGCCGTT GCCTCGCTTG AGGCTGCCGG CAAGAAGCCG
GGCGACGTGA TGTTGATGAG TTCCAACGGT GCGCCCGTTG GCCTCGACCT GATCCGCAAG
GGCTGGCTGA ATGTCGAAGT CGAGCAACCG CTCTATGCAC AGGCAGCAGC CATTGCGATG
TTCATGGACA AGGTCGTCGG CAAAAAGCCG ATCAAGGCTG GAGACTATGA TGTACTTGGG
CTGAAGAGCG TTGTGACCAT GGAAACCTGG GGACCGAACA TCAAGATCCC TGGCTCTGCC
ATCACCAAGG AGAATGTCGA TAACCCATCC TTCTGGGGCA ATCTGAAGCC GCCGACAGCT
GCGATCAAAT CCGTCGAGTG A
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| Protein sequence | MKRLLTVLLG ILMLNLAAWT SAAAQTKGMV YYLVPTLLDE FQTGSVNALS MFLGQVGYEM
KTLNADNKTD AQQSQMNDVI ALKPAAIILA AVDFNALKPS IEAARAAGIP VVEFDRQITS
TPSDFTSVAG TVEIGHIAGD HAISLLKGKN GDVKGKILQV PGDPGDPYTL DIQKGFEEKI
KAFPGVKIIS VPAVQWEASA AGTIVSDQML ANPDIDLIFL HAAHLSVAAV ASLEAAGKKP
GDVMLMSSNG APVGLDLIRK GWLNVEVEQP LYAQAAAIAM FMDKVVGKKP IKAGDYDVLG
LKSVVTMETW GPNIKIPGSA ITKENVDNPS FWGNLKPPTA AIKSVE
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