| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5290 |
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| Symbol | |
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| ID | 7380658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 293788 |
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| End bp | 294711 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648920 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002547157 |
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| Protein GI | 222106366 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.728282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGTTC TCATTTTCAA ACGGCTGCTC ATTGCCCTGG CGACGATTGT GTCTGTCATT
ATCCTGTCGG GCATTCTCAT CCATATCGTC CCTGGCGATC CGGTCACTGC GATGATGGCG
CAATCCGTAA CCGCAAGTCC GCAAGCGATG GCGCAAATGC GGGCCAAGCT GGGGCTCGAC
CTGCCCGTAT GGCAGCAGGT GGGGCTCTAT ACCTGGCACG TTTTCCAGGG TGATCTTGGC
ATGACAATCC GCGGCAACGA ACCTGTCGCA AGATTGCTGC TCCAGCGGTT GCCAAACACC
TTTGCTCTGG CGGTTTCAGG GCTCGGCGTT GCCCTTGCCA TTGGCATACC GCTCGGTTTT
CTGGCGGCAA TCCACCGTGG AAAACTGACC GATACGGCCG TCATGGTGAT TGCGGTTCTG
GGTGTCTCCA TCCCCGGCTT CTGGTTTGGG CTGATCATGA TCCAGGTGTT TTCGCTGAAG
CTCGGCTGGT TCCCAGTCGC AGGTTCGGGT TTTCGCAACA TCATCCTGCC AGCCCTGACA
CTGGGTCTGA CCTATTGCGC CTTGGTGGCG CGCATGACGC GCTCGGCCCT CGTTGAGGTC
CTGGCCGAGG ATTATATCCG CACGGCCCGC GCGCGCGGGC TTCGTGAGTA TCAGGTGCTT
TTGGTTCATG CCCTGAAGCC GGCGCTGATC AGCATCGTCA CGGTTGTCGG GCTGGTCTTT
GCCTATCTCC TCGGCGGTCA GGTGATCATC GAGAACGTCT TTTCGTGGAA TGGCATCGGC
CGGCTGGCCG TCCAGGCCAT GCTGGAGCGT GACTATCCGA TGATCCAGGG CTTCATTGTT
GTCTTCGCCA GTTCGGTTGT CATCGTCTCG ATGCTGATCG ACATTCTCTA CGGCTTTCTG
GATCCCCGGA TGAGGCAAAG ATGA
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| Protein sequence | MLVLIFKRLL IALATIVSVI ILSGILIHIV PGDPVTAMMA QSVTASPQAM AQMRAKLGLD
LPVWQQVGLY TWHVFQGDLG MTIRGNEPVA RLLLQRLPNT FALAVSGLGV ALAIGIPLGF
LAAIHRGKLT DTAVMVIAVL GVSIPGFWFG LIMIQVFSLK LGWFPVAGSG FRNIILPALT
LGLTYCALVA RMTRSALVEV LAEDYIRTAR ARGLREYQVL LVHALKPALI SIVTVVGLVF
AYLLGGQVII ENVFSWNGIG RLAVQAMLER DYPMIQGFIV VFASSVVIVS MLIDILYGFL
DPRMRQR
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