| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5228 |
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| Symbol | |
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| ID | 7381356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 228408 |
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| End bp | 229439 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648868 |
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| Product | AraC-type DNA-binding domain-containing protein |
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| Protein accession | YP_002547105 |
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| Protein GI | 222106314 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAG TCGATGCGCG TTACGTGACT GCCAATATCC CGGCGTTTCT CATTCGCAGC
CTCGTGATGA CGCTCACGGA TTTTGGTCTC GACGCCTCGC GATTAACGGC TGGCCTCGGC
ATTCCCATGG AGGATCTTGC CGACCCAGCC TGTCGGGTTT CTTTTCGCCA GGGACGTGAG
GCGATCCTGC GGGCCATGAA AATGACCAGG GGCAAGGCGC TTGGATTGGA GACCGGGATT
CGCGAAAAGA TTACCTCTGT GGGCCTCGTC GGTTATGTGA TGGTAACGGC AGCGACTGTG
GGTGACGCGG TCAAGCTTGG CCTTGATCTG CAAAAAGATA CCGGCAGCAT GCTGGAATTC
GACACCAGGG AAAGCCCGGA GGGCGTCGTC GTCACGGCGG CGAGCCGTTT TCACGATCCC
GACATCTATG TTTTCCTGGT GGAAGAGGCT TTTGCCAGTT TCATGGGGGT CGCCCACGGC
CTTGTCGGTG AGGGCTTCAA GCCTGTCCGG GTCGATTTTG CTTACCCTGC GCCAGCGCAT
ACGGAAGCAT ATCAACGGGT TTTCGGCTGC CCGGTCCGAT TTGGCCAGAT GGAAAACGCC
TTCATCTATG ATGCCGCCTG GTACAAGCAA CCGCTGCTGA CATCCGATCC TCTTAGCCAT
CGCCAGCTTC TTGAATTCAT GGCCTATAAC CGGGCCCGAA GCCGCGAGGC GGCTGAAATC
ATCGAATCCG TCGAAAGGGT CCTGCGACAG AAGCTGCACA GCCGCATGCA TATTTCCAAG
GTGGCCCGTG CGCTTGGCAT GAGCGAGCGC ACCTTGCGTC GCAGACTTGC CGAGAGCGGG
GTTTCCTTCC AATCGCTTCT GGATGATCTT CGCAAGAACC GCACGCTCGA ACTGTTGGGC
AACAGGAACA TGTCTGTCGA GCAGATCGCA TTTGCGGTCG GATTTTCGGA CCCTCATAAT
TTCCGGCGCG CCTTCCGCCG TTGGACTGGC ACCACGCCTG GCGCGCTTCG TGCGGATCTA
TCGCCTATTT GA
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| Protein sequence | MKTVDARYVT ANIPAFLIRS LVMTLTDFGL DASRLTAGLG IPMEDLADPA CRVSFRQGRE
AILRAMKMTR GKALGLETGI REKITSVGLV GYVMVTAATV GDAVKLGLDL QKDTGSMLEF
DTRESPEGVV VTAASRFHDP DIYVFLVEEA FASFMGVAHG LVGEGFKPVR VDFAYPAPAH
TEAYQRVFGC PVRFGQMENA FIYDAAWYKQ PLLTSDPLSH RQLLEFMAYN RARSREAAEI
IESVERVLRQ KLHSRMHISK VARALGMSER TLRRRLAESG VSFQSLLDDL RKNRTLELLG
NRNMSVEQIA FAVGFSDPHN FRRAFRRWTG TTPGALRADL SPI
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