Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5194 |
Symbol | |
ID | 7381329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 192570 |
End bp | 193880 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643648842 |
Product | Permeases of the major facilitator superfamily |
Protein accession | YP_002547079 |
Protein GI | 222106288 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCA TTGTCAGTTC CGAGCCCTCG GCCCCGCTGG GGTCAACCCA AGCCAAGGCA CCGCCGCGTA TCCGGCGCAT GCAGATCACC TCGCTTTGCC TGCTGGTGGT GGCTGGCGTC ATCAATTACA TGGATCGTGG GACGCTGGCG GTTGCCAATC ATCGGATCAC CGAAGACATG GGTTTGACCC TCGGTGAAAT GGGCCTGCTG CTCTCGGCAT TTTCCTGGAG CTATGCGCTG GCGCAGCTTC CGGTTGGAGC AATGGTGGAC CGTCTCGGAC CGCGTCGCCT TTTGGGTTTC GGTCTGGTGT TCTGGTCGCT GGCCCAGGCC GCCGGAGGTT TTGTCACGTC CTTTACCCAG TTTATCCTGA GCCGTATCGG TCTGGGCATT GGTGAAGCGC CGCAATTTCC GTCGGCTGCC CGGGTTGTCA GCAACTGGTT CCCGGTGAGT AAGCGCGGCG TGCCAACAGG CATCTTCAAT TCAGCCTCTC CACTGGGCAC AGCTATCGCG CCTCTGCTCC TGACACAGCT TCTGATCGTT CTGGATTGGC GCTGGGTCTT CATCATCACC GGTGCTGCTG GCCTGGTCAT GGCCGCATTC TGGTTCATGC TGTATCGTGA CCCAAAGGAT ATGGGGCTGA CCGCTGAGGA ACGCTCGTAC CTCTCTTCGG AGACGGAAGA AAAGCAGCAG AAGGTGACGC TTGCCGATTG GGGCCAGCTG TTTTCCTATC GCGCCACCTG GGGCATGATC CTTGGCTACT TCGGCAATGT TTACCTTAAC TGGGTTTATC TCAGCTGGTT GCCATCCTAT CTGGTCAATG AACGGCACAT GAGCCTTGCC CGCACCGGTT TCATGGCCTC CGTCCCGTTC TTCTGCGGCT TTATCGGCTG CCTCGTGGCT GGCTGGCTGT CGGACAAGAT CATTAAGAAA ACCGAGGCTT CACCGGTCCG TGGTCGTCGC ATTCCTGTTG TCATCGCCAT GCTCGGCATG GCCGCCTTCA CCGTGCCTGC GGCGCTGGTT GCCGACAATA ACATTGCGAT TTTCTGCATT TCCGTGGTGA TTTTCCTCAC CAATGCCGCC TCTGCCTGCT CTTGGGCGCT GGTGACAGCC GTTGCTCCGA AAAACCGGGT GGCGTCACTC GGTTCCCTGC AGAATTTCGG CGGATTCCTG GGTGGCTCCC TGGCTCCGAT CGCAACCGGG TTTATTGCCG AATACTCGTC TTTCGTACCC GCCTTGCTCA CCGGAGCTGC CATCGCATTC GTTGGTGCCG CCAGCTACTT CTTCCTGGTT CGTGAACCGA TGGACCAGTG A
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Protein sequence | MSTIVSSEPS APLGSTQAKA PPRIRRMQIT SLCLLVVAGV INYMDRGTLA VANHRITEDM GLTLGEMGLL LSAFSWSYAL AQLPVGAMVD RLGPRRLLGF GLVFWSLAQA AGGFVTSFTQ FILSRIGLGI GEAPQFPSAA RVVSNWFPVS KRGVPTGIFN SASPLGTAIA PLLLTQLLIV LDWRWVFIIT GAAGLVMAAF WFMLYRDPKD MGLTAEERSY LSSETEEKQQ KVTLADWGQL FSYRATWGMI LGYFGNVYLN WVYLSWLPSY LVNERHMSLA RTGFMASVPF FCGFIGCLVA GWLSDKIIKK TEASPVRGRR IPVVIAMLGM AAFTVPAALV ADNNIAIFCI SVVIFLTNAA SACSWALVTA VAPKNRVASL GSLQNFGGFL GGSLAPIATG FIAEYSSFVP ALLTGAAIAF VGAASYFFLV REPMDQ
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