| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5149 |
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| Symbol | |
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| ID | 7380950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 139777 |
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| End bp | 141111 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648803 |
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| Product | hypothetical protein |
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| Protein accession | YP_002547040 |
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| Protein GI | 222106249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTC TTTCGAAATT CAAGGCCACA GCATTGGTGA TCGGCATCTC GTTGAGTGTC
GCGCTTCCCG CAGCGCATGC CGATGAGCAG TATTTTCCCT TGCAGAGCTA CCGCGTCGGT
CCCTATGCCG CAGGTGGAAC CGGTTTCTTT GGCGGGTTTA TCGATTATCT CAACCTGATC
AACACCCGTG ATGGCGGCGT CAATGGCGTC AAGCTCACCT GGTCGGAGGC CGAAACCCAA
TACGAGGTCG AGCGTGGCGT CGAAGCCTAT GAGCGCCTGA AAAGCAATCC GAACGTCGCC
GCCTGGAACC CGTTATCCGT GGGCATCGCC TATGCGATGA TCGACCGCAT TACCGCCGAC
AAGACACCGT TGATCACCAT CAACCACGGT CGTACGGATT CCACCGATGG CCGCGTATTT
CCCTATGTTT TCCCCTTGTT GCTCAATCCC TACAGCGAAA CCTCCGGTAT CGTGAACTAT
ATTGGCTCCA AGCTCGGCGG GATCGAAAAC CTGAAGGGCA AGAAGATCGT GGTTCTCTAT
CACGGCTCGC CTTATGGCAA GGAAACCATT CCGATCTATG AATTGCTGGC CAAGAAATAT
GGTTTTGATG TCCAGCAGAT CGAGGTGCCG CATCCCGGTA ACGAACAACA GGCCCAATGG
CTCACCATTC GTCGCGCCAA ACCCGATTAT GTCGTGTTGC GCGGCTGGGG CGTGATGAAC
CCGGTGGCCC TGAAAACAGC TGCCAAAACC GGCTTTCCGG TGGACCATAT CATTGGCAAT
GTCTGGTCCA ATTCTGAAGA AGATGTGATC CCGGCAGGCG ATGCCGCCAA AGGCTATACC
GCCATCACCA CCCAGGCGTC CGGTGCCGAG TATCCAGTCG TCAAGGAAAT CGTCAAGACG
CTTTATGATA GTGGCAAGGG CAACCTGGAA GACAAAAAAC GCATCGGCTC CGTCTATCAC
AACCTGGGTA TCGTCAATGG TATCCTGAAT GTCGAGGCGA TCCGCATCGC GCAGGCAAAA
TTCGGCAAGC GCACGCTGAC CGGCGACGAA GTACGCTGGG GCTTCGAGCA TTTGCAACTG
GACCAGAAGC GCGTTGAGGA ACTTGGCGCC AAAGACCTGT TTCACTCCAT CAATGTCACC
TGGGACAATC ACGAGGGCAA TGGTTATGTG ACCTTCCAGC AATGGGACGG CAAGAAATGG
AACGTCGTGT CTGATTGGAT TGCACCGGAT TGGGCGTTGC TGCGGCCGAT CATTGAAAAG
TCCTCCGAGG CTTATGCCAA GGATAAAGGC ATCAAGATCC GCACGGCTGC CGATGCGGAT
GGCGTTACCA ATTAA
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| Protein sequence | MSILSKFKAT ALVIGISLSV ALPAAHADEQ YFPLQSYRVG PYAAGGTGFF GGFIDYLNLI
NTRDGGVNGV KLTWSEAETQ YEVERGVEAY ERLKSNPNVA AWNPLSVGIA YAMIDRITAD
KTPLITINHG RTDSTDGRVF PYVFPLLLNP YSETSGIVNY IGSKLGGIEN LKGKKIVVLY
HGSPYGKETI PIYELLAKKY GFDVQQIEVP HPGNEQQAQW LTIRRAKPDY VVLRGWGVMN
PVALKTAAKT GFPVDHIIGN VWSNSEEDVI PAGDAAKGYT AITTQASGAE YPVVKEIVKT
LYDSGKGNLE DKKRIGSVYH NLGIVNGILN VEAIRIAQAK FGKRTLTGDE VRWGFEHLQL
DQKRVEELGA KDLFHSINVT WDNHEGNGYV TFQQWDGKKW NVVSDWIAPD WALLRPIIEK
SSEAYAKDKG IKIRTAADAD GVTN
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