| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5137 |
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| Symbol | |
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| ID | 7380940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 126281 |
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| End bp | 127582 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648793 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_002547030 |
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| Protein GI | 222106239 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.319423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACTA CCAGTTTCAC GGCTATCGCC GGGGATGCGT CACGCTGCGC GCGTCTCACT
TTGGCAGCGT TTACCCTCGC ATTGGCCTCA AGCGGCTCGG CCTTGGCCCA GCCCAAAGGC
GATCTGGTCA TCCTGCAATG GATGGCAGGG TCTGACCTTG AGGTGATCCA AAATCTGGAA
AAAGCCTTCA TGGCCAAATA TCCGGATGTG AAAATCAAGG AAGTACCGGT GACATGGTCC
GGCGATCCGC GTGGCGGGCT TCGCACCTCG TTGATGGGCG GCGAAAAGGC TGATCTGATG
ATCAATACGT GGCCTGCTTT CCGCACAGAA CTCGTCACCG CCGGTCTTTT GCGCCCGCTG
GATGATGCCT ATTCCGCTCT GAAATGGGGA GAACGGCTCG ACAACAGCTG GAAGGATCTT
GGGTCTGTCT CCGGCCAACT CTACGGCGTT ACCTTCACTT ATGGCGACCG TAGCGGTCTT
TGGTATGATA CCGGAACCTT CAAAAAGGCA GGCATCACCA CGCCGCCTAA GGATTGGGCG
CAGTTTCTGG ACACTATCGC CAAGCTGAAG AGTGCCGGTG TGGTGCCAAT GGCCGTCCCT
GCCAAGACCT GGGCGCATGC CGAAGTGTTT GAAACGCTGA TCTTACGCGA GGGCGGTGCG
GATCTTTCGC GCAAGCTGGT GGCCCACGAG ATCCCCTGGA CCGATGATCG CGTCAAGGCG
GCCCTTCGCA AATGGCGCGA GCTGTTGAGC GCCGGTTGCT GCGGCGATGC CTCCACAATG
CTTGGCACAG AGTGGGACAA TGCCTCCGAC CGGGTATTGA AAGAGCGCAA AGCAGGCTTT
GTCCAGATGG GAATGTGGAT CAACAACCGC GCCGAGACCG TCTACAAGCT TGCCCCGGAT
CAGTTCGGCC TGTTCCAGTT TCCAGCCACA GGGCAGGGCC ATGACACTGC CGCCAGTGTC
GATGCCAAGG AGTTTGTCGC ATTGGCATCC GGCGGCAATA GCGAGGCTGC TGACGCCTTC
ATGGACTTCA CCATAAGCCG TGAAGGTGCC AACATCATTG CCAAGGGCGG GTTAGCATCG
TCCTCTCGAG CTGTTGATGT TGGGCTTTAT AGCCCTGCCA TTCAGGCGTC CAATACCTTT
GTGACCGGGG CGGATACGGC CTTTGTTCTG GGGGATGGCC TGCCCGGCGA TCTGGCTGAT
GAGTATCGCA TTCAGCTCCA GAAATTCCTG GGTGATCCCA GCGATGCCAA TATCGATAGG
GTGACGGCGG CGATCGAGGC CAAGGCAAAG GGATCGTATT GA
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| Protein sequence | MMTTSFTAIA GDASRCARLT LAAFTLALAS SGSALAQPKG DLVILQWMAG SDLEVIQNLE
KAFMAKYPDV KIKEVPVTWS GDPRGGLRTS LMGGEKADLM INTWPAFRTE LVTAGLLRPL
DDAYSALKWG ERLDNSWKDL GSVSGQLYGV TFTYGDRSGL WYDTGTFKKA GITTPPKDWA
QFLDTIAKLK SAGVVPMAVP AKTWAHAEVF ETLILREGGA DLSRKLVAHE IPWTDDRVKA
ALRKWRELLS AGCCGDASTM LGTEWDNASD RVLKERKAGF VQMGMWINNR AETVYKLAPD
QFGLFQFPAT GQGHDTAASV DAKEFVALAS GGNSEAADAF MDFTISREGA NIIAKGGLAS
SSRAVDVGLY SPAIQASNTF VTGADTAFVL GDGLPGDLAD EYRIQLQKFL GDPSDANIDR
VTAAIEAKAK GSY
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