| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5058 |
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| Symbol | |
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| ID | 7381215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 51188 |
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| End bp | 52057 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648729 |
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| Product | ABC transporter permease protein |
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| Protein accession | YP_002546966 |
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| Protein GI | 222106175 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.987794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCCC CCAACATCAT CCTTGCCGCC GATGTCGCAG CAGCCAAGCC CTATGACAAT
ATCAAGCCGG TCGAACAGAA ACTGAGCGTC TTTGAAACGC TGTGGGGCAT CAGTGCCTTG
CGCAAGACGC TGTTGATCGT GGTTCTGGCA ATCATCTGGC AGGTCTATGC CTCCTTTCTC
GACAATCCGC TGCTGTTTCC CACCTTGAGC GACACATTGG TGACGCTGAC CGACCGCTTT
GCCGACGGCA CCCTGCCCGC TCGCATCTGG ACGACGCTGC AAGTCCTGTT CATGGGCTAT
ACTGTCGGCA CCGTGCTTGC CGCGCTGCTG ACAGTGCTTG CCATCAACAC CCGCATTGGC
ACCGATTTTC TGGAAACCAT GACAGCGATG TTCAACCCGC TGCCCGCCAT TTCGCTGCTG
CCTTTGGCGT TGATCTGGTT TGGGCTCGGC GCCTCCAGCC TGGTCTTCGT TCTGGTTCAC
TCGGTCCTGT GGGCCGTGGC ACTCAACACG CATTCCGGCT TTCTTGGCGT ATCGCGCACC
TTGCGCATGG TCGGCGCCAA TTACGGACTA ACCGGCATTT CCTATGTGCT GCGCATCCTG
GTTCCGGCGG CCTTTCCTTC GATCCTCACC GGCCTGAAAA TCGGCTGGGC CTTTGCCTGG
CGCACGCTGA TTGCTGCCGA ACTGGTGTTC GGCGTTTCCT CGGGACAGGG CGGTCTTGGC
TGGTTCATCT TCGAAAACCG CAACCTGCTG GATATACCCG CAGTGTTTGC AGGCCTGCTG
ACCGTCATCA TTATCGGCCT GATCGTCGAA AACCTAGTCT TCCAGACGAT CGAGCGCCAC
ACAATCCAGA AATGGGGCAT GAAGGAATAG
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| Protein sequence | MLSPNIILAA DVAAAKPYDN IKPVEQKLSV FETLWGISAL RKTLLIVVLA IIWQVYASFL
DNPLLFPTLS DTLVTLTDRF ADGTLPARIW TTLQVLFMGY TVGTVLAALL TVLAINTRIG
TDFLETMTAM FNPLPAISLL PLALIWFGLG ASSLVFVLVH SVLWAVALNT HSGFLGVSRT
LRMVGANYGL TGISYVLRIL VPAAFPSILT GLKIGWAFAW RTLIAAELVF GVSSGQGGLG
WFIFENRNLL DIPAVFAGLL TVIIIGLIVE NLVFQTIERH TIQKWGMKE
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