| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5056 |
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| Symbol | |
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| ID | 7381213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 48665 |
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| End bp | 49390 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643648727 |
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| Product | hypothetical protein |
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| Protein accession | YP_002546964 |
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| Protein GI | 222106173 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGACT ATGTGCTGAG CGACGCGACC CGCGCCAAAT ACAAGAAGAT CTCGACCGCA
TCGATTGCCA CCGCGCTGTT TAAACGCGGC CTGCGCAACC AGTTCATTCA AGGCGTCGTG
CCGGTGGCGC CAAAGGCCGA AACCATGGTC GGCCAGGCGT TTACGCTGCG CTATATCGTG
GCGCGCGAGG ACCGCAACCC GATCACCGTG TTCCGAGACC AGAAGCATCC GCAGCGTGTC
GCCATGGAAA TCTGCCCTCC CGGCCATGTG CTGGTGATGG ATGCGCGCAA GGACGCCCGT
GCCGCCACCG CAGGCTCGAT CCTGATCACC CGTCTGGCGC TGCGAGGTGC AGCGGGCGTC
GTTTCCGATG GCGGCTTTCG CGATGCAGAC GGGATTGGTG CCCTGGACAT GCCCGCCTAT
TACGCAAAAC CATCGGCACC GACCAATCTG ACGCTGCATG AAGCCATCGA TATCAACGTG
CCGATCTCCT GTGGCGATGT CGCGGTATTT CCTGGCGATG TGCTTGTTGG CGACCGCGAT
GGTGTCATGG TCATTCCCGC CCACCTGGCG GACGAATTGG CCGACGAATG CACCGATATG
GAAAGCTACG AGGATTTCGT CCTTGAACAG GTCAAGGCCG GAGCGGTGAT TATCGGCCTT
TATCCCTGCA CGAAGGACGA ACATCAGCAG AAATACGAGG CTTGGCGCAA GGAACATGGG
CGCTGA
|
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| Protein sequence | MTDYVLSDAT RAKYKKISTA SIATALFKRG LRNQFIQGVV PVAPKAETMV GQAFTLRYIV
AREDRNPITV FRDQKHPQRV AMEICPPGHV LVMDARKDAR AATAGSILIT RLALRGAAGV
VSDGGFRDAD GIGALDMPAY YAKPSAPTNL TLHEAIDINV PISCGDVAVF PGDVLVGDRD
GVMVIPAHLA DELADECTDM ESYEDFVLEQ VKAGAVIIGL YPCTKDEHQQ KYEAWRKEHG
R
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