| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5029 |
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| Symbol | |
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| ID | 7381192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 24625 |
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| End bp | 25617 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643648706 |
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| Product | hypothetical protein |
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| Protein accession | YP_002546943 |
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| Protein GI | 222106152 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGGT TTTTACCCGA TAAATTCACC CTGATGCTTG TGTGTACAGT GGCTCTAGCT
TCGGTCTTGC CGATCAGCGG GCAGCCGGCC GTTTATTTCG GCTGGGCAAC GAAAGTTGCG
ATTGCGGCGC TGTTTTTTCT GCATGGCGCC CGCCTGTCGC GCGATGTTGT GATTGCCGGG
ATGCTGCATT GGCGACTGCA TCTGTCGATC CTGGCCGTGA CCTTCGTGAT CTTTCCTTTG
CTCGGCCTCG GGCTGGGGTT TTTCGTGCAG GGCTTCCTGC CGTCCTCGCT TTATCTTGGC
ATTCTTTATA TCTGCGTCCT GCCATCGACC GTCCAATCGT CGATTGCCTT TACCTCCATG
GCAGGGGGCA ATGTGCCCGC GGCGATCTGT TCAGCTTCGG CCTCTAATAT TTTCGGGATG
ATCCTCACCC CCCTGCTCTG CGGGCTGCTG CTATCGGCCG GTGGCCATGG CGGTATTTCG
CTCGACGCTG TCTTGCAAAT CTTCGTGCAA TTGCTGCTTC CGTTCATTGT GGGGCAGTTG
CTGCAACCCT TTATCGGCAA TTGGGTCAGG GCGCGCAAAT CCTTGCTGTC GCCAATTGAT
CGTGGCTCGA TCCTGATGGT GGTCTATGCC GCCTTCAGCG AGGCGGTCAT CGAGGGGATC
TGGAAGCATT TCTCGCTGGC CGATATTGGC GCGGTCGTCG TGGTCGATAT CGTCTTGCTG
GCATTGGCGC TGATCATCAC CACCTTCGGC AGCCGGTTGC TCGGCTTTTC CAAGGAGGAT
GAAATCGCCA TCACCTTCTG CGGCTCGAAG AAAAGCCTGG CCTCCGGCGT GCCGATGGCC
AGCGCGATTT TTGCCGGGCA AAGCATTGGC GCCATCGTCA TGCCGCTGAT GCTGTTTCAT
CAGATCCAGC TGATGGCTTG CGCGGTGATT GCCCAGAAAT ATGCGGAAAA GCGCAAGCTG
AAGGAAGCCG AAGTGGTAGT TGCTTCGGCC TGA
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| Protein sequence | MTRFLPDKFT LMLVCTVALA SVLPISGQPA VYFGWATKVA IAALFFLHGA RLSRDVVIAG
MLHWRLHLSI LAVTFVIFPL LGLGLGFFVQ GFLPSSLYLG ILYICVLPST VQSSIAFTSM
AGGNVPAAIC SASASNIFGM ILTPLLCGLL LSAGGHGGIS LDAVLQIFVQ LLLPFIVGQL
LQPFIGNWVR ARKSLLSPID RGSILMVVYA AFSEAVIEGI WKHFSLADIG AVVVVDIVLL
ALALIITTFG SRLLGFSKED EIAITFCGSK KSLASGVPMA SAIFAGQSIG AIVMPLMLFH
QIQLMACAVI AQKYAEKRKL KEAEVVVASA
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