Gene Avi_9864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9864 
Symbol 
ID7379996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011986 
Strand
Start bp48578 
End bp51058 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content63% 
IMG OID643648286 
Productheavy-metal transporting P-type ATPase 
Protein accessionYP_002546523 
Protein GI222102382 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCA TCCCGAAGAT CGAAGCCTCC AAGACCTTGC CCCTTCCAAC CGATTTCGGG 
ATCGAAGGCA TGAGCTGCGC ATCCTGCGTC GTGCGTGTCG AGAAAGCCAT CGCCGCTGTT
CCAGGGGTCG CTTCCGCCAT CGTCAACCTC GCCACCGAGC GCGCAACCGT CACCTATAAT
GAGGTGGTAC CAACCGAAGC TGTCCTCCAG GCTATCGAGA AGGCCGGTTA TGAACCCAAA
CTCGAAACCC GCGAGCTCGG CGTCGAGGGC ATGACCTGTG CCTCGTGCGT GTCCCGCGTC
GAGAAGGCAC TGAAGTCCGT TCAGGGTGTG AGACAAGCAA CGGTCAACCT CGCGACCGAA
AAGGCTACCG TTCGTGTCGT CTCCGGAACC TCCACACTCG TCCTTGAGGA TGCCGTACGC
GCCGCGGGCT ATGAGGTGCG CAGGATAACC GCTGTCCGTT CCACGGACAA CGACGAGGAT
CGTCGAGACC GCGAGGCCAA CCGCCTGACG ATGTCGCTGG CCCTGTCCGC GGCGCTGACG
CTTCCTCTGT TCGTCCTAGA GATGGGGTCG CATTTCATCC CGGCCCTCCA TGACTGGATC
ATGGTGAACA TCGGCATGGG CAACAACCTC GTCATCCAGT TCGTGCTCGC CACCGCCGTC
CTGTTCGGAC CTGGGCTCCG CTTTTTCAGG AAGGGCGTTC CCAACCTGCT TCACTGGACC
CCCGACATGA ATTCGCTGGT GGTGCTGGGC ACGTCGGCCG CTTGGGGTTA TTCCGTCGTC
GCGACGTTCC TGCCTGGTGT CCTGCCTTCT GGCACCGCCA ACGTCTACTA CGAGGCGGCA
GCCGTTATCG TCACGCTGAT CCTGCTCGGC CGCTACCTGG AAGCGCGCGC CAAAGGCAAG
ACCAGTCAGG CGATCAAGCA CCTCATCGGC CTTCAGGCGA AGACCGCGCA CGTGAAGCGA
GGCGAGGACT TCGTCGAGAT CGAAATCGGA GCCGTGTCAC TCGGCGACAT AGTGCGCATC
CGCCCCGGCG AGAAAGTCCC GGTCGACGGC CGCCTCGTCG ATGGTGGTTC TTACGTGGAC
GAGTCCATGA TCACGGGCGA GCCCGTTCCG GTAAAGAAAT CCGCTGGTGA CGATGTCGTT
GGCGGCACGA TCAACAAAAC GGGGTCCTTT ACGTTCGAGG CGACGAAGAT CGACGCGGAC
ACGCTTCTCG CCCAGATCAT CAAAATGGTC GAGGCGGCGC AGGGCTCGAA GCTGCCGATC
CAGGCGCTTG TCGATCGGGT CACGGGATGG TTTGTCCCGG CTGTCATCGC CGCGGCCGCC
CTCACCTTCC TGGCTTGGCT GCTGTTTGGC CCCTCGCCGG CGCTCACCTT TGCTCTGATC
AACGCCGTCG CCGTACTGAT CATCGCCTGC CCTTGCGCTA TGGGCCTTGC CACCCCGACG
TCCATCATGG TCGGCACTGG GCGCGCAGCC GAACTCGGTA TCCTCTTTCG CAAGGGCGAA
GCGCTCCAGA CACTGCGCGA TGTCGATGTC GTCGCATTGG ACAAGACCGG CACATTGACG
AAGGGCAAAC CGGAATTGAC AGACTTCGTG GTCAGCGACG GCTTCGACCG CGCCGAAACG
CTGCGGCTAG TGGCAGGCCT GGAGACGCAG TCCGAACACC CGATCGCCGA AGCCATCGTC
GCAGCGGCGA AGGCCGACGG CCTTTCACTT TCCGACGTCT CTGATTTCGA GGCTGCCCCC
GGCTACGGGG TGAGCGGCCG GATCGACGGC CGGACAGTGC TGGTCGGTGC CGACCGATCC
ATGACGAAAA GCGGCATCGA CGTCTCGGCG TTCTCGGCGC AGGCGGCCGC CTTGGGCGAT
GCGGGCAAGT CACCGCTCTA TGCCGCTATC GACGGCAGAC TGGCCGCGAT TATCGCAGTG
GCCGACCCCA TAAAGGACAC GACGCCGCAA GCCATCAAGA CCCTGCATGC GCTCGGTCTC
AAGGTCGCGA TGATCACGGG GGACAACAGG CGCACCGCCC AGGCCATCGC CCGCCAGCTC
GACATCGACG AAGTCGTCGC CGAAGTCCTG CCGGACGGCA AGGTCGAAGC GGTCCGCAAG
CTGCGGAGCG GCGGGCGCAA GGTGGCTTTC ATCGGCGACG GCATCAACGA TGCGCCGGCC
CTTTCGGAAG CCGACATTGG CCTCGCGGTC GGGACCGGAA CCGACATCGC TATAGAAAGT
GCCGACGTCG TTCTGATGTC GGGTGATCTG AATGGCGTGC CGCGTGCGAT TGCCATCAGC
AAGGCGACAA TCCGCAACAT CCGGCAGAAC CTGTTCTGGG CCTTCGCCTA CAACGTCAGC
CTCGTGCCTG TTGCGGCCGG CGTCCTCTAC CCGGTTAACG GCACGCTGCT GTCGCCGATC
CTCGCCGCTG GCGCGATGGG CCTGTCCAGC GTGTTCGTAC TGGCCAACGC CCTGCGCCTG
CGACGCTTCA AGACAACCTG A
 
Protein sequence
MTAIPKIEAS KTLPLPTDFG IEGMSCASCV VRVEKAIAAV PGVASAIVNL ATERATVTYN 
EVVPTEAVLQ AIEKAGYEPK LETRELGVEG MTCASCVSRV EKALKSVQGV RQATVNLATE
KATVRVVSGT STLVLEDAVR AAGYEVRRIT AVRSTDNDED RRDREANRLT MSLALSAALT
LPLFVLEMGS HFIPALHDWI MVNIGMGNNL VIQFVLATAV LFGPGLRFFR KGVPNLLHWT
PDMNSLVVLG TSAAWGYSVV ATFLPGVLPS GTANVYYEAA AVIVTLILLG RYLEARAKGK
TSQAIKHLIG LQAKTAHVKR GEDFVEIEIG AVSLGDIVRI RPGEKVPVDG RLVDGGSYVD
ESMITGEPVP VKKSAGDDVV GGTINKTGSF TFEATKIDAD TLLAQIIKMV EAAQGSKLPI
QALVDRVTGW FVPAVIAAAA LTFLAWLLFG PSPALTFALI NAVAVLIIAC PCAMGLATPT
SIMVGTGRAA ELGILFRKGE ALQTLRDVDV VALDKTGTLT KGKPELTDFV VSDGFDRAET
LRLVAGLETQ SEHPIAEAIV AAAKADGLSL SDVSDFEAAP GYGVSGRIDG RTVLVGADRS
MTKSGIDVSA FSAQAAALGD AGKSPLYAAI DGRLAAIIAV ADPIKDTTPQ AIKTLHALGL
KVAMITGDNR RTAQAIARQL DIDEVVAEVL PDGKVEAVRK LRSGGRKVAF IGDGINDAPA
LSEADIGLAV GTGTDIAIES ADVVLMSGDL NGVPRAIAIS KATIRNIRQN LFWAFAYNVS
LVPVAAGVLY PVNGTLLSPI LAAGAMGLSS VFVLANALRL RRFKTT