| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9816 |
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| Symbol | avhB6 |
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| ID | 7379958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011986 |
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| Strand | - |
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| Start bp | 16261 |
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| End bp | 17289 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648247 |
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| Product | type IV secretion protein AvhB6 |
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| Protein accession | YP_002546484 |
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| Protein GI | 222102343 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGATT TCCTCGGTGG GCTTTTGGAT CGGATCGAAC AGACGGGCGC TAGCTTTACG
CAAAGCGCCT ATGGGGTTGT TGCGAGCGAA GTAACGCCGC TTCTAACCGT GCTTTTGATT
GCCTACGTCG CCTATTACGG TCTTCAACTG ATCATGGGAA CTGCGCGTGT CAGCGTTGGG
GAGGTGATCA GCCGCGTAGT CAGAATGACG CTGATCGTTG CTTTCATAAA CTCATGGGGT
AACTTCAACA CGTTCTTCTA CGCCTGGCTG AGCGATACAC CGGAAGACGT GGGACGGGCA
ATTCTCGCGG TCAGCAATAC AGGTATCACA GAGCCGACAA ACGGCCTTTC GATGATCTGG
GAAACGGCCA ACAAGGCGGC GGGGGCCTTT GCTGAACAGG CCGGTTATTT TTCTGTTCTT
CCGGCTATGG TCGGTTTTCT GATCATGTTT GGCGTCGGCG TGTTTATCGC CGTCGCTCTT
GCGATCCTTT TGCTTGCGAA GGTCATGATG TGGGTGCTGC TAGGAACCGC CCCCATTTTC
ATCGCATGTT TGTTGTTTCA ACCTACGCGA AGCTACGGAA TGGCATGGTT CCAAAGTGTG
CTGATGTACG CGATTATTCC GTTGTTCGTT TACGTGGTTG CTGCGTTCTT GATCTCCGCA
ATGGATCCAG AGTTGACGAA AGTCGCTGCA GCGGCCGATC AACGCAGGCT TCAACTCGAT
GATGTTGCAG CTTTCCTTCT TTTGTGTGCC GCCGGCGCCT TCGTGCTTTT CAACATACAG
ACACTTGCTC AGGGGATTAC GGGGGGTGTC GCAGCCGGGA TCGGCCAAGT GGCGCGAACC
GTCGGAGGCC TGACGGGCTT CAGTGCCCCC GCTGCTGCAC TCACAGGAGC GCGCAGTGTT
TCCGGCGCAG CCGGTCGGAT CGGGATGGCT GCAAGGGAAC GTACCCATGC GGGAATGCGG
GAAAATATTC GAAATGCAAG CGCGGACGCG ATGCAGAAAA GCATCAGCAG TAACAGCGTG
CCACGTTAA
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| Protein sequence | MEDFLGGLLD RIEQTGASFT QSAYGVVASE VTPLLTVLLI AYVAYYGLQL IMGTARVSVG
EVISRVVRMT LIVAFINSWG NFNTFFYAWL SDTPEDVGRA ILAVSNTGIT EPTNGLSMIW
ETANKAAGAF AEQAGYFSVL PAMVGFLIMF GVGVFIAVAL AILLLAKVMM WVLLGTAPIF
IACLLFQPTR SYGMAWFQSV LMYAIIPLFV YVVAAFLISA MDPELTKVAA AADQRRLQLD
DVAAFLLLCA AGAFVLFNIQ TLAQGITGGV AAGIGQVART VGGLTGFSAP AAALTGARSV
SGAAGRIGMA ARERTHAGMR ENIRNASADA MQKSISSNSV PR
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