| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9270 |
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| Symbol | traI |
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| ID | 7367866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 210729 |
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| End bp | 211367 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643644429 |
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| Product | putative autoinducer synthesis protein |
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| Protein accession | YP_002542726 |
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| Protein GI | 222083323 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGGA TACTGACAGT CTCGCCGGAC CAGTACGAAC GAAATCGAAG CTTCCTCAAA
CAGATGCACG GTCTTCGCGC GATGGTGTTC GGAGGCCGTC TTGAATGGGA CGTCTCCATC
ACAGCAGGGG AAGAGCGCGA CCAGTACGAT GACTTCAAAC CAACCTACCT TCTAGCGATT
ACCGATAGTG GATTGATCGC CGGTTGCGTC CGTCTTCTTC CGGCTTCCGG CCCGACGATG
CTCGACCAGA CCTTTCCCCA GCTGCTCGAA ACGGGCTCAC TCGTCGCACA TTCCGGAATG
GTCGAAAGTT CGCGCTTCTG CGTCGATACC GCGCTTGCAT CGCGGAGGGA TGCATGCCAA
CTGCATCTCG CAACGCTCAC CCTGTTCGCT GGCATCATCG AATGGTCGAT GGCAAGCGGC
TACAGCGAGA TCGTCACAGC GACCGATCTT CGTTTCGAAC GCATCCTGAA GCGGGCCGGA
TGGCCGATGC GACGGCTCGG TGAACCGGCC GCGATCGGCA ACACCATCGC CATTGCCGGG
AGCTTGCCGG CGGATAGGAC GAGCTTCCGG CAGGTTTGCC CACCGGGCTA TCATGCGATC
CCCCAGATCG ACGTGGCAGC GATCAGGAGT GCCGCGTGA
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| Protein sequence | MMRILTVSPD QYERNRSFLK QMHGLRAMVF GGRLEWDVSI TAGEERDQYD DFKPTYLLAI
TDSGLIAGCV RLLPASGPTM LDQTFPQLLE TGSLVAHSGM VESSRFCVDT ALASRRDACQ
LHLATLTLFA GIIEWSMASG YSEIVTATDL RFERILKRAG WPMRRLGEPA AIGNTIAIAG
SLPADRTSFR QVCPPGYHAI PQIDVAAIRS AA
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