| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9218 |
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| Symbol | |
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| ID | 7367749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 170909 |
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| End bp | 172033 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643644392 |
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| Product | ABC transporter |
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| Protein accession | YP_002542689 |
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| Protein GI | 222083286 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.797463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGCC TATCCACCAT AGTCTGGCTC GGAATCAAGG AACTGCGGAC GCTTGCTAAG
GACATGATGA TGATCCTCTT CATCATCTGG TCCTTCGGTT TCAGCATCTA CACGCAAGCG
AGCGGCGGCG GAGAAACCGT CAACAACGCG GCAATCGCTT TTGTCGACGA AGATCACTCT
CGGCTGTCCC GCTCGATCGC GGAGCAATTT GCGCCGCCCT ACTTCCAACT GGTCAAAACA
ATCAGAGCAG CCGATATCGA CCGGGCGATG GACGAGGGGG ACTACACCTT TATCCTCGTT
ATTCCGCCGG GATTTGAAAA GGACACGATA CGCGGACGCG ACACCGATGT TCAACTGCTT
GTGGATGCGA CGGCCTCCCA GCAGGCGGGG CTCGGGTCCA GCTACATTCA GAATTACGTG
ACCGCTGCCG TAAAACGACT CCGCAACGAA TATGAACAGA CGACCGGCCT TTCCTCCAAT
CTCGTCATTC GCCGCGCCTT TAATCCCAAC GGCACACAAT CCTGGTTCAG GGCGATCGTG
AGCCTCACGG ATCAACTGTC AATGCTGATC ATCATCCTCA CCGGCGCAGC CCTTCTGCGT
GAGCGCGAGC ATGGCACGAT CGAGCATCTG CTGGTCATGC CGATCACTGC GGTCGAAATC
GCGCTCGCCA AGGTCTGGTC GAACGGACTT GTCATCCTCG TCGCGTTCGC TTGTTCGCTT
TTGTTCATCG TCGAGGGCGC GCTTGACGTT CCCGTCGCCG GCTCGCACGC CCTGCTCTTT
CTTGGCACCG CAATCTACGT ATTCGCTGCA TCCGCCATCG GTATTTTCCT CGGCACGTTG
GCGCGCACTA TGGCCCAATT TGCGCTGCTC ATGATCATGA CGGTCATGCC CATCATGATG
TTGTCCGGCG GTATGTCTCC GGTGGAGAGC CAACCGCAAT GGATTCAGTA TGTGACGTGG
TTGCTTCCGT CGCGCCACTA CATCAGCTTC ATGCAGGCGA TTGTTTATCG GGGTGCTGAT
TTCGCGACCG TGTGGAAGGA GTTCGCGACC GTATTGGTAA TGGGTTTGAC CTTCCTCACC
GCAAGCCTTC TTGCCTTCCG GCGCTCGGTG GCGGCCACGC GCTAA
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| Protein sequence | MISLSTIVWL GIKELRTLAK DMMMILFIIW SFGFSIYTQA SGGGETVNNA AIAFVDEDHS
RLSRSIAEQF APPYFQLVKT IRAADIDRAM DEGDYTFILV IPPGFEKDTI RGRDTDVQLL
VDATASQQAG LGSSYIQNYV TAAVKRLRNE YEQTTGLSSN LVIRRAFNPN GTQSWFRAIV
SLTDQLSMLI IILTGAALLR EREHGTIEHL LVMPITAVEI ALAKVWSNGL VILVAFACSL
LFIVEGALDV PVAGSHALLF LGTAIYVFAA SAIGIFLGTL ARTMAQFALL MIMTVMPIMM
LSGGMSPVES QPQWIQYVTW LLPSRHYISF MQAIVYRGAD FATVWKEFAT VLVMGLTFLT
ASLLAFRRSV AATR
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