Gene Avi_9129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9129 
SymbolhyuB 
ID7367683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011984 
Strand
Start bp95913 
End bp97835 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content60% 
IMG OID643644330 
Producthydantoin utilization protein 
Protein accessionYP_002542627 
Protein GI222083224 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTTT CTGAAAACGG CTACTACATC GAAAAATATC TGAAGTGCGC CAATTGCGGT 
CAGCTGCTCT ACGGCGTGTC CGACGAACGC TTGCACGGCG GGCACACGCT TTACTGCAGC
GAGTGGTGCG AAAGCTGGGA TGGCATGCGC GCGGACCGTT CGGCTCGTGC ATTGCTGCCC
TTCGAGCCAT CGGCGCCAGT GGCATCTACG AGCACGCGGC TTGCACCGCT CGATCCCGTC
ACCATGAACA TCCTTGAATC GACCATGGTT TCGGTCTGCC GCGAGATGGG CATATTGCTC
ATGAAGACGT CCTATTCGAC GATCTTCAAT GAAGGTCTCG ATTTCACCTG CGCTTTCGCC
GACAAGGACG GCGAGATGAT TGCGGTGGCC GAATTCAACC CGGCCATGAT CGGTGGCATG
CCCATCCTGA TGAAGAGCTG CGCGCAGGAG ATCGATTTCG ATACTCTGGA AGAAGGCGAC
GTCATCCTGC ATAACGACCC CTATCGGGGC GGCCTCCATC TTCCCGAACA TACCTTCTTC
AAACCCGTCT TCATCGACGG CGAACTCGTG GGTTTTGCCG TCTGCATAGG CCACGTCGCC
GAGATCGGCG GCATGGTGCC GGGCGCATTC GCGGGCGAGG CGACGGAAGT CTTCCAGGAA
GGCCTTCGCG TGCCGCCGAT CAAGATCAAG AAGGCCGGCA AAGATGTCGA CGAGGTCTGG
AAATTGCTTC TCGCCAACGT TCGCACGCCG CGCCAGAACT ATGGTGACCT TCGGGCGATG
ATCGCCAGCG TCGATTTGGG TGTCGACCGT CTGACGGCCG TTATCCGCAA GTATGGCAAG
GACGTGTTCA AGCAGACATG CTTGGATCTA ATGGATTACT CAGAACGCCG TATGCGCGCC
GAAATCGCGT CCTTCGATGA CGGCATGTAC AGCTTCGAGG ACACCGTCGA GGACGACGGC
ATAACGGCGC AGTCTTATAA GGTCGCCGTC GACGTCTTTG TGCAGGGCGA CGAGTTCATC
GCCGATTTCC GCCGCACGGC AAAGCAGGCA CGTGGTCCGA TCAACGCCAC TTATGGCGTG
ACGACAAGTG CTACCTACAA TGCCGTCCTG CACATGACGG ATCCCAGCAT TCCGAAGAAC
TCCGGCTGCT TCCGCCCCAT CAAGGTCGTC TCGCCGCCCG GAACTGTCGC CAACGTCGAT
TTCCCGGCGC CGGAAGTTGC CGGCAACACC GAAACCCATC CACGTCTGGC CGGGATCGTC
ATCGGCGCAA TGGCGACCTG CGCGCCCGAG CGTGTCATGG CTGCTGAAGC CGCCACCGGC
ACCAACTTCG TCTTCGGCGG CCATCATCCT GATTATGACG AATACTTCGC CTGCTATGAC
ATCATGGCCG GTGGCTGGGG CGGTCGTAGC GGCTTCGACG GCAACAATTG CAACATCGCC
ATCAACGGCA ATTGCCGCTT CAATCCAACG GAAGTCTTCG AAACCCGCTT CCCCATCCGC
GTCGAGAATT GCGAGCTGAT CACGGATTCG GCTGGCGCTG GCGAATATCG CGGCGGTCTC
GGCTATGAGC GGACTCTGCT GATGACCGAT GTGGCCATTA CCGGCAGCCA GTGCACGGAT
CGCCATACGA TCAGGCCCTG GGCATTGTTC GACGGCAAGG AAGGCGACAA TGGCGCGACC
CACGTGCTGA AGGCAAGCTC GACCGAGTGG CAGAACGTGA AGGAAGCCTA CGGCAAGCGT
TCGACCAGCA AGTACGCCAA TATCCGCTTC GAGCCAGGCG ATCGCATTCG GTTGCGCACG
CCGGGAGGCG GTGGCTTCGG CGCGCCGACT GCGCGTGCGA AGGATGCTAT CGAACGCGAT
GTCGCCGAAG GCTTCGTTTC CATCGAAGCG GCAGAGCAAA TCTACGGCTG GACCAAGGCC
TGA
 
Protein sequence
MRFSENGYYI EKYLKCANCG QLLYGVSDER LHGGHTLYCS EWCESWDGMR ADRSARALLP 
FEPSAPVAST STRLAPLDPV TMNILESTMV SVCREMGILL MKTSYSTIFN EGLDFTCAFA
DKDGEMIAVA EFNPAMIGGM PILMKSCAQE IDFDTLEEGD VILHNDPYRG GLHLPEHTFF
KPVFIDGELV GFAVCIGHVA EIGGMVPGAF AGEATEVFQE GLRVPPIKIK KAGKDVDEVW
KLLLANVRTP RQNYGDLRAM IASVDLGVDR LTAVIRKYGK DVFKQTCLDL MDYSERRMRA
EIASFDDGMY SFEDTVEDDG ITAQSYKVAV DVFVQGDEFI ADFRRTAKQA RGPINATYGV
TTSATYNAVL HMTDPSIPKN SGCFRPIKVV SPPGTVANVD FPAPEVAGNT ETHPRLAGIV
IGAMATCAPE RVMAAEAATG TNFVFGGHHP DYDEYFACYD IMAGGWGGRS GFDGNNCNIA
INGNCRFNPT EVFETRFPIR VENCELITDS AGAGEYRGGL GYERTLLMTD VAITGSQCTD
RHTIRPWALF DGKEGDNGAT HVLKASSTEW QNVKEAYGKR STSKYANIRF EPGDRIRLRT
PGGGGFGAPT ARAKDAIERD VAEGFVSIEA AEQIYGWTKA