Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9129 |
Symbol | hyuB |
ID | 7367683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | + |
Start bp | 95913 |
End bp | 97835 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643644330 |
Product | hydantoin utilization protein |
Protein accession | YP_002542627 |
Protein GI | 222083224 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTTT CTGAAAACGG CTACTACATC GAAAAATATC TGAAGTGCGC CAATTGCGGT CAGCTGCTCT ACGGCGTGTC CGACGAACGC TTGCACGGCG GGCACACGCT TTACTGCAGC GAGTGGTGCG AAAGCTGGGA TGGCATGCGC GCGGACCGTT CGGCTCGTGC ATTGCTGCCC TTCGAGCCAT CGGCGCCAGT GGCATCTACG AGCACGCGGC TTGCACCGCT CGATCCCGTC ACCATGAACA TCCTTGAATC GACCATGGTT TCGGTCTGCC GCGAGATGGG CATATTGCTC ATGAAGACGT CCTATTCGAC GATCTTCAAT GAAGGTCTCG ATTTCACCTG CGCTTTCGCC GACAAGGACG GCGAGATGAT TGCGGTGGCC GAATTCAACC CGGCCATGAT CGGTGGCATG CCCATCCTGA TGAAGAGCTG CGCGCAGGAG ATCGATTTCG ATACTCTGGA AGAAGGCGAC GTCATCCTGC ATAACGACCC CTATCGGGGC GGCCTCCATC TTCCCGAACA TACCTTCTTC AAACCCGTCT TCATCGACGG CGAACTCGTG GGTTTTGCCG TCTGCATAGG CCACGTCGCC GAGATCGGCG GCATGGTGCC GGGCGCATTC GCGGGCGAGG CGACGGAAGT CTTCCAGGAA GGCCTTCGCG TGCCGCCGAT CAAGATCAAG AAGGCCGGCA AAGATGTCGA CGAGGTCTGG AAATTGCTTC TCGCCAACGT TCGCACGCCG CGCCAGAACT ATGGTGACCT TCGGGCGATG ATCGCCAGCG TCGATTTGGG TGTCGACCGT CTGACGGCCG TTATCCGCAA GTATGGCAAG GACGTGTTCA AGCAGACATG CTTGGATCTA ATGGATTACT CAGAACGCCG TATGCGCGCC GAAATCGCGT CCTTCGATGA CGGCATGTAC AGCTTCGAGG ACACCGTCGA GGACGACGGC ATAACGGCGC AGTCTTATAA GGTCGCCGTC GACGTCTTTG TGCAGGGCGA CGAGTTCATC GCCGATTTCC GCCGCACGGC AAAGCAGGCA CGTGGTCCGA TCAACGCCAC TTATGGCGTG ACGACAAGTG CTACCTACAA TGCCGTCCTG CACATGACGG ATCCCAGCAT TCCGAAGAAC TCCGGCTGCT TCCGCCCCAT CAAGGTCGTC TCGCCGCCCG GAACTGTCGC CAACGTCGAT TTCCCGGCGC CGGAAGTTGC CGGCAACACC GAAACCCATC CACGTCTGGC CGGGATCGTC ATCGGCGCAA TGGCGACCTG CGCGCCCGAG CGTGTCATGG CTGCTGAAGC CGCCACCGGC ACCAACTTCG TCTTCGGCGG CCATCATCCT GATTATGACG AATACTTCGC CTGCTATGAC ATCATGGCCG GTGGCTGGGG CGGTCGTAGC GGCTTCGACG GCAACAATTG CAACATCGCC ATCAACGGCA ATTGCCGCTT CAATCCAACG GAAGTCTTCG AAACCCGCTT CCCCATCCGC GTCGAGAATT GCGAGCTGAT CACGGATTCG GCTGGCGCTG GCGAATATCG CGGCGGTCTC GGCTATGAGC GGACTCTGCT GATGACCGAT GTGGCCATTA CCGGCAGCCA GTGCACGGAT CGCCATACGA TCAGGCCCTG GGCATTGTTC GACGGCAAGG AAGGCGACAA TGGCGCGACC CACGTGCTGA AGGCAAGCTC GACCGAGTGG CAGAACGTGA AGGAAGCCTA CGGCAAGCGT TCGACCAGCA AGTACGCCAA TATCCGCTTC GAGCCAGGCG ATCGCATTCG GTTGCGCACG CCGGGAGGCG GTGGCTTCGG CGCGCCGACT GCGCGTGCGA AGGATGCTAT CGAACGCGAT GTCGCCGAAG GCTTCGTTTC CATCGAAGCG GCAGAGCAAA TCTACGGCTG GACCAAGGCC TGA
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Protein sequence | MRFSENGYYI EKYLKCANCG QLLYGVSDER LHGGHTLYCS EWCESWDGMR ADRSARALLP FEPSAPVAST STRLAPLDPV TMNILESTMV SVCREMGILL MKTSYSTIFN EGLDFTCAFA DKDGEMIAVA EFNPAMIGGM PILMKSCAQE IDFDTLEEGD VILHNDPYRG GLHLPEHTFF KPVFIDGELV GFAVCIGHVA EIGGMVPGAF AGEATEVFQE GLRVPPIKIK KAGKDVDEVW KLLLANVRTP RQNYGDLRAM IASVDLGVDR LTAVIRKYGK DVFKQTCLDL MDYSERRMRA EIASFDDGMY SFEDTVEDDG ITAQSYKVAV DVFVQGDEFI ADFRRTAKQA RGPINATYGV TTSATYNAVL HMTDPSIPKN SGCFRPIKVV SPPGTVANVD FPAPEVAGNT ETHPRLAGIV IGAMATCAPE RVMAAEAATG TNFVFGGHHP DYDEYFACYD IMAGGWGGRS GFDGNNCNIA INGNCRFNPT EVFETRFPIR VENCELITDS AGAGEYRGGL GYERTLLMTD VAITGSQCTD RHTIRPWALF DGKEGDNGAT HVLKASSTEW QNVKEAYGKR STSKYANIRF EPGDRIRLRT PGGGGFGAPT ARAKDAIERD VAEGFVSIEA AEQIYGWTKA
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