| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9052 |
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| Symbol | |
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| ID | 7367786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 33087 |
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| End bp | 34187 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643644280 |
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| Product | polyhydroxybutyrate depolymerase |
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| Protein accession | YP_002542577 |
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| Protein GI | 222083174 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGTTAC CCTCCAATTC ACGGCAACTG ATCGAAGTGA AAAACTTCGG AGCGAACCCC
GGTAAGCTGA AGTGCTGGCT TTATCTGCCG ACCATCCTGG CTCCGAAAAC ACCGCTCGTC
GTCGTCCTAC ACGGGTGCAC GCAGAACGCT GCAGCTTATG ATCATGGCTC CGGTTGGTCG
AAGCTGTCGG AAGAGAAGGG ATTCGCGGTC CTGTTTCCGG AGCAGCAGCG CGCCAATAAC
GCCAATCTGT GTTTCAACTG GTTCGAGCCG GGCGACACCC GGCGTGATCA GGGCGAAGCT
CTTGCGATCC GGGAGATGAT CGGGCACGTC ATCGAGTCGC AGGGGATAGA TCCTGAACGT
GTCTTCATCA CGGGACTGTC GGCCGGAGGC GCGATGGCGA ACGTCATGCT GGCGACCTAT
CCCGAATTGT TTGCCGGCGG CGCGATCATT GGCGGGCTTC CTTACGGAAC GGCCTCAGGA
GTGGGTCAGG CTTTCGAACG GATGCGGGGC CATAACCCGC CGAGCGAAAG TCAGCTTCAA
TCGGCCCTGA TGTCCGCAGC TTCCAGCTGG GGTTCATGGC CGCCGATTTC TGTCTGGCAC
GGGACGCACG ACCAGACGGT CAAGCCGATC AATGCCGAGC AGATTGCCCA TCAATGGGGC
GGCATGCATC AGATCTCCGC GACACCGGAC TTGATCGAGT CCGTCAATGG CCACAGCCGT
AAGGCCTGGC TCGATGAAAG CGGCAAAGCG GTCATGGAGG TTTATCTCAT CAAGGGAATG
GCGCACGGTG TTCCCCTGTC GTTCGCAGCC AAAGCCCCGT TGGGGCACTC CGGACCGTTC
ATGCTGGAGG CCGGAATTTC TTCGACGACG CGCATTGCCA GGACATGGGG CCTTGCCGAC
GATGCCGATG TCGCCGCAAC CGAGGCGGTA TTCAACCCTG ACTTGAAGCA CGACGCGGTT
CCCTCAGGCA TTGAAAATGT TATCGCCAAG GCAATGGCAT ATGCAAAACC AGGCGCTGTG
AATAACGTCG GCGATCGACA TGATCACGGC GTCGGCAAGG TTATCAACGA CGCGCTTCGC
GCCGCAGGGC TAATTCGATA A
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| Protein sequence | MTLPSNSRQL IEVKNFGANP GKLKCWLYLP TILAPKTPLV VVLHGCTQNA AAYDHGSGWS
KLSEEKGFAV LFPEQQRANN ANLCFNWFEP GDTRRDQGEA LAIREMIGHV IESQGIDPER
VFITGLSAGG AMANVMLATY PELFAGGAII GGLPYGTASG VGQAFERMRG HNPPSESQLQ
SALMSAASSW GSWPPISVWH GTHDQTVKPI NAEQIAHQWG GMHQISATPD LIESVNGHSR
KAWLDESGKA VMEVYLIKGM AHGVPLSFAA KAPLGHSGPF MLEAGISSTT RIARTWGLAD
DADVAATEAV FNPDLKHDAV PSGIENVIAK AMAYAKPGAV NNVGDRHDHG VGKVINDALR
AAGLIR
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