Gene Avi_9030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9030 
Symbol 
ID7367772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011984 
Strand
Start bp18707 
End bp19432 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content55% 
IMG OID643644267 
Producthypothetical protein 
Protein accessionYP_002542564 
Protein GI222083161 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGTCAGCGT ATCTCCATCT TATCGGGGGC AACCACCCCT GCCAGCCATT GCTTAGAAAA 
TGGCCATGGA GCGAACCGCA CCGCGATTAC TCCATGTTTA AGTTATGCGG CCATGGCTGG
TTCGTCCAAC AGGCTGCGAG GATCTGCCAC CGAACTCGCG GGCTTCACGC CATCCTTGCT
GAGGCTAGTG CCCCCGCGCG GACTTTCGAC AAGATGACCT ACTCCCCCTG GGTTGATGGC
AGGCCATTCA TCCACTTGCG GCGGAAATGC GTCGAGACCA TCGTTGCTAC CGGCGGAAAG
AGCGACGTCT GCGTGCTGGC GACGGTATTC GGCGCTATCG ATCTCGGTTT CCACGTGATC
GTGTTCAGCG ACACCGTTTG TAGTTGTGCA GACAAGACCC ACGATGCTGC CGCCGAACTG
CTTGGCGAAC GGTTTTCAGT GAAGCTTGAC TTGCTTAAAA CTGATGAATT TCTCGCGACG
GCGGGATCAG CTCGAACCTT TCCAAGAGGT GCCGCCTATC ACCGGCCGAT CGGCTTGCAT
CCTCGATGCA CCAACCGAAT GACCAAGCTT CAGCCTTCTG TATCCATTCT TCCTTTTTTC
CAGCTTCTTG TGAACCAGAG ACGTAAGGCA GGACAGGATT GGCATCAATC TTCACCCCGA
GCACGCGTGC ATTCATTCCA CGCTGTTGCC AATCCAGCGA AACCTGTATG TCGAGATACA
TTCTGA
 
Protein sequence
MSAYLHLIGG NHPCQPLLRK WPWSEPHRDY SMFKLCGHGW FVQQAARICH RTRGLHAILA 
EASAPARTFD KMTYSPWVDG RPFIHLRRKC VETIVATGGK SDVCVLATVF GAIDLGFHVI
VFSDTVCSCA DKTHDAAAEL LGERFSVKLD LLKTDEFLAT AGSARTFPRG AAYHRPIGLH
PRCTNRMTKL QPSVSILPFF QLLVNQRRKA GQDWHQSSPR ARVHSFHAVA NPAKPVCRDT
F