Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9030 |
Symbol | |
ID | 7367772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011984 |
Strand | - |
Start bp | 18707 |
End bp | 19432 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643644267 |
Product | hypothetical protein |
Protein accession | YP_002542564 |
Protein GI | 222083161 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGTCAGCGT ATCTCCATCT TATCGGGGGC AACCACCCCT GCCAGCCATT GCTTAGAAAA TGGCCATGGA GCGAACCGCA CCGCGATTAC TCCATGTTTA AGTTATGCGG CCATGGCTGG TTCGTCCAAC AGGCTGCGAG GATCTGCCAC CGAACTCGCG GGCTTCACGC CATCCTTGCT GAGGCTAGTG CCCCCGCGCG GACTTTCGAC AAGATGACCT ACTCCCCCTG GGTTGATGGC AGGCCATTCA TCCACTTGCG GCGGAAATGC GTCGAGACCA TCGTTGCTAC CGGCGGAAAG AGCGACGTCT GCGTGCTGGC GACGGTATTC GGCGCTATCG ATCTCGGTTT CCACGTGATC GTGTTCAGCG ACACCGTTTG TAGTTGTGCA GACAAGACCC ACGATGCTGC CGCCGAACTG CTTGGCGAAC GGTTTTCAGT GAAGCTTGAC TTGCTTAAAA CTGATGAATT TCTCGCGACG GCGGGATCAG CTCGAACCTT TCCAAGAGGT GCCGCCTATC ACCGGCCGAT CGGCTTGCAT CCTCGATGCA CCAACCGAAT GACCAAGCTT CAGCCTTCTG TATCCATTCT TCCTTTTTTC CAGCTTCTTG TGAACCAGAG ACGTAAGGCA GGACAGGATT GGCATCAATC TTCACCCCGA GCACGCGTGC ATTCATTCCA CGCTGTTGCC AATCCAGCGA AACCTGTATG TCGAGATACA TTCTGA
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Protein sequence | MSAYLHLIGG NHPCQPLLRK WPWSEPHRDY SMFKLCGHGW FVQQAARICH RTRGLHAILA EASAPARTFD KMTYSPWVDG RPFIHLRRKC VETIVATGGK SDVCVLATVF GAIDLGFHVI VFSDTVCSCA DKTHDAAAEL LGERFSVKLD LLKTDEFLAT AGSARTFPRG AAYHRPIGLH PRCTNRMTKL QPSVSILPFF QLLVNQRRKA GQDWHQSSPR ARVHSFHAVA NPAKPVCRDT F
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