Gene Avi_8126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8126 
Symbol 
ID7365211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand
Start bp83507 
End bp83815 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content57% 
IMG OID643641748 
Producthypothetical protein 
Protein accessionYP_002540045 
Protein GI222080182 
COG category[S] Function unknown 
COG ID[COG3831] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0551582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGTCATTGG ACGGCAAATT CCGAATGCGC GATTCTGCGG GCATGATCAC GCAGCCCTAT 
CACCTCTACG TCGAGCGTAT CGCGCCGGAA AAAAACATGG CGCGGTTCTA CGCCCTTGCT
GTCCAGCCGA CATTGTTTGG CGAGGTGTCG CTAGTGCGCG CCTGGGGTCG GATTGGAACG
CGCGGACAGC AGATGGTGCA TCTGTTCGAC AATGAGAGCC AGGCTATCAA CCTGTTCCTC
GACGTCCTTT GCGAAAAGCG CAAACGGGGT TATCGACCAA AAGCACCTGT GGACATCCAG
CGGATCTGA
 
Protein sequence
MSLDGKFRMR DSAGMITQPY HLYVERIAPE KNMARFYALA VQPTLFGEVS LVRAWGRIGT 
RGQQMVHLFD NESQAINLFL DVLCEKRKRG YRPKAPVDIQ RI