| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8083 |
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| Symbol | |
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| ID | 7365189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 57688 |
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| End bp | 61323 |
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| Gene Length | 3636 bp |
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| Protein Length | 1211 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641728 |
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| Product | helicase |
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| Protein accession | YP_002540025 |
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| Protein GI | 222080162 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG4646] DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0239915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTTG GTATTAGGCC TGGTAACGGC ACGATCCGCG AAGGCAGCTT CTTCATCGAC
AACGGTCGAG GCCTGATGCA GATGCTGGAC GGGTCAGCCG TGCCGGTCAT CGTGCGCAAA
GGACGCTCGG GCGACGGGAT TTCCGAGAAA CATGTCCGGA TCATCAGCAA GCTGATTCCC
ATCCGCGACG CGGTCCGTGA GGTGCTGAAG GCACAGGAGA CTGATCGGCC CTGGCGCGAC
CTTCAGGTCC GGCTGCGTAT CGCCTGGTCG AGCTTCGTGC GCGACTTCGG GCCGATCAAC
CACACCACTG TCTCGATCCA GGAGGATGCC GAGACCGGTG AGGCCAAGGA GACCCACCGC
CAGCCGAACC TTGCACCCTT CCGCGACGAT CCGGATTGCT GGCTGGTCGC CTCGATCGAG
AATTACGATC TGGAGACGGA CACGGCGAAG CCAGGTCCGA TCTTCGCCAC CCGTGTGATC
GCTCCGCCGA TCTCGCCTGT CATCACCAGT GCGGCTGATG CGCTGGCGGT CGTACTCAAC
GAACGCGGCC ATGTCGATCT CGATCATATC GCCGAGTTGT TGCACCGCGA CGTTTCCACC
GTTATCGCCG ATCTCGGCGG CGAGGTTTTT CGCGATCCCG CCGACGGATC CTGGCAAACG
GCCGACGCCT ATCTTTCCGG CTCGGTTCGC ACCAAGCTCA CCGCCGCGCA GGCTGCAGAG
GAGCTTGATC CGGCGTACGA GCGCAATGTC CGCGCCCTGA AGCAAGTTCA GCCGGCCGAT
CTGCGACCGT CCGACATCAC TGCCAGGCTT GGGGCACCAT GGATCCCGGC CGCCGATATC
GTCGCCTTCG TCAAGGAGAG GATGGATGCC GATATTCGCA TCCATCATCT GCCGGAGCTA
GGGTCCTGGA CCGTGGAGGC GCGGCAGTTG GGCTATAGTG CTGCCGGTAC ATCGGAATGG
GGCACAAGCC GCCGTGATGC CGGTGAACTG CTTACTGACG CGCTCAACAG CCGGGTCCCA
CAAATTTTCG ATGTCTTCAA GGATGCCGAT GGCGAGCGCC GGGTTCTCAA TGTCGTCGAC
ACCGAGGCAG CGCGTGATAA GCTGCAGAAG ATCAAGCAGT CCTTCCAGGA CTGGGTCTGG
ACCGATCCCG ATCGCACCGA CCGGTTGGCG CGGGTCTACA ACGACCGCTT CAACAACATC
GCGCCACGTA AATTCGACGG CTCCCATCTG AAACTCCCCG GTGCCTCTGG CGCCTTCGTT
CTTTATGGGC ACCAGAAACG CGGCATCTGG CGGATCATTG CCGATGGCTC GACCTATCTC
GCGCATGCCG TCGGGACCGG CAAGACGATG ACCATGGCAG CCGCGATCAT GGAGCAACGC
CGGCTGGGCC TGATCGCCAA GGCGATGCTG GTCGTCCCCG GCCATTGCCT CGCACAGGCC
GCCCGTGAGT TTCTGGCGCT TTATCCGAAC GCCAATATCC TGGTGGCCGA TGAAATGAAT
TTCACCAAAG ACAAGCGTGC CAGGTTCCTG TCGCGCGCCG CGACGGCCAC TTGGGATGCG
ATCATCATCA CCCATTCGGC GTTTCGCTTC ATCACTGTGC CCGCGGCTTT CGAGCAGGAG
ATGATCCAGG ACGAACTGCA GCTCTACGAG GATCTGCTCA CCAAGGTCGA CAGCGAGGAC
CGCGTCTCGC GCAAGCGCCT CGAGCGACTG AAGGAAGGTC TGCAGGAGCG GCTTCAAGGT
TTGGCGACCC GTAAGGATGA TCTTTTGACG ATCTCGGAGA TCGGCGTCGA CCAGATCGTC
GTCGACGAGG CGCAGGAATT CCGCAAGCTG TCCTTTGCCA CCAATATGTC AACGCTGAAG
GGAATTGACC CGAATGGCTC GCAGCGCGCC TGGGATTTCT ACGTGAAGTC TCGCTACATC
GAAACGAAGA ACCCCGGCCG CGCTCTGGTG CTCGCTTCAG GCACGCCGAT CACCAATACG
CTCGGCGAAA TGTTCTCGAT CCAGCGGCTG CTCGGCCGTG AAGCGCTTGC CGAGCGCGGC
CTGCACGAAT TCGACGCCTG GGCGAGCACA TTCGGCGACA CCACCACGGC GCTCGAAATC
CAGCCGTCCG GCAAATACAA GCCGGTCAGC CGCTTCGCCA GCTTCGTCAA TGTCCCTGAA
CTGATTGCAA TGTTCCGCAG CTTTGCAGAT GTCGTGTTGC CGGACGATCT CCGCCAGTAC
GTAAAGGTGC CGGCAATCTC GACGGGCCGG CGTCAAATTC TGACCGCGAA GCCAACGCAG
TCCTTCAGAA ATTATCAGAC CATTCTCGAC GCCCGTATCA AGGCCATTGA GCAGCGCGAG
GGGCCGACCA AACCCGGCGA TGACATCCTG CTCTCGGTCA TCACCGATGG CCGCCACGCG
GCGATCGATC TGCGTCTGGT CGACCCGGAC AATGACAACG AGCCCGATAA TAAGCTCAAT
CTCCTCGTCG AGAATTCTTA CCGCATCTGG GCGGAAACCG CAGAACGGGA GTATGTTCGT
TCTGACGGGA AGCCCTTCGA ACTCACGGGC GCGGCACAGA TGATCTTCTC GGACCTCGGC
ACCATCAATG TCGAGAAAAC CCGAGGCTTC TCGGCCTATC GCTGGATCAG GGATGAACTG
ATCCGCATGG GGGTGCCGCC TTCTGAAATC GCGGTCATGC AGGATTACAA GAACCGAGGC
AAAGCAGCGC CTTTTTGGCG ACGTGTGGGC CGGCAAGGTC CGCTTTCTGA TCGGTTCGTC
GGAGACCATG GGCACCGGCG TCAACGCCCA GCTTCGCTTG AAGGCGCTTC ATCATCTCGA
CGTGCCGTGG CTGCCGTCGC AGATCGAGCA GCGCGAGGGT CGCATCGTGC GGCAAGGCAA
CCAGCACGAC GAGGTCGATA TCTTTGCCTA TGCCACGCAG GCTCGCTCGA CGCTAGCATG
TGGCAGAACA ACGAGCGCAA GGCACGGTTC ATCGCAGCAG CGCTTTCTGG TGACACGTCG
ATCCGGCGTC TTGAAGACAT GGGCGAGGGG CAGGCAAATC AGTTTGCCAT GGCTAAGGCG
ATCGCCAGTG GCGATGAACG TTTGATGCAA AAGGCTGGTC TCGAAGCTGA TATCGCCCGC
CTCGAGAGGT TGCGTGCCGC CCATGAGGAC GATCTGTTCG CTGTCCGCAG GCAGGTCCGC
GATGCCGAGC GCGAGATCGA AACCGCGACC CGGCGCATCG TCGAGATCGG CCAGGATATC
GAGCGCCTGG TTCCGACGTC GGGCGAAGCA TTCACCATGG CTGTGACAGG CAAGCCCTAT
ACCGAACGTA AGGATGCTGG CCGGGCGCTG ATGAAGGAGA TCCTCACCCT CGTTCAACTA
CAGCAAGAGA GTAAGGTCCA CATCGCCACC GTTGGAAGCT TTGATCTTGT CTACGATGGC
GAAAAATTCG GCCGTAGTGA CAATTACCGC TACCAGACGT TGCTGCAGCG CACTGGCGCA
GACCGTCACG CCTCTGGGTG CCATCTCGCG CCTCGAGCAT GCTCTCGACG GGTTCGACCA
GGAGCGGGAG CGCTACCGCC AGCGGTTGGA GGAATACCGA CGTCGCCTGG CATCCTATCA
GTCGCGGAAG GATGGCACCT TCGCCTTTGC CGATGA
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| Protein sequence | MQVGIRPGNG TIREGSFFID NGRGLMQMLD GSAVPVIVRK GRSGDGISEK HVRIISKLIP
IRDAVREVLK AQETDRPWRD LQVRLRIAWS SFVRDFGPIN HTTVSIQEDA ETGEAKETHR
QPNLAPFRDD PDCWLVASIE NYDLETDTAK PGPIFATRVI APPISPVITS AADALAVVLN
ERGHVDLDHI AELLHRDVST VIADLGGEVF RDPADGSWQT ADAYLSGSVR TKLTAAQAAE
ELDPAYERNV RALKQVQPAD LRPSDITARL GAPWIPAADI VAFVKERMDA DIRIHHLPEL
GSWTVEARQL GYSAAGTSEW GTSRRDAGEL LTDALNSRVP QIFDVFKDAD GERRVLNVVD
TEAARDKLQK IKQSFQDWVW TDPDRTDRLA RVYNDRFNNI APRKFDGSHL KLPGASGAFV
LYGHQKRGIW RIIADGSTYL AHAVGTGKTM TMAAAIMEQR RLGLIAKAML VVPGHCLAQA
AREFLALYPN ANILVADEMN FTKDKRARFL SRAATATWDA IIITHSAFRF ITVPAAFEQE
MIQDELQLYE DLLTKVDSED RVSRKRLERL KEGLQERLQG LATRKDDLLT ISEIGVDQIV
VDEAQEFRKL SFATNMSTLK GIDPNGSQRA WDFYVKSRYI ETKNPGRALV LASGTPITNT
LGEMFSIQRL LGREALAERG LHEFDAWAST FGDTTTALEI QPSGKYKPVS RFASFVNVPE
LIAMFRSFAD VVLPDDLRQY VKVPAISTGR RQILTAKPTQ SFRNYQTILD ARIKAIEQRE
GPTKPGDDIL LSVITDGRHA AIDLRLVDPD NDNEPDNKLN LLVENSYRIW AETAEREYVR
SDGKPFELTG AAQMIFSDLG TINVEKTRGF SAYRWIRDEL IRMGVPPSEI AVMQDYKNRG
KAAPFWRRVG RQGPLSDRFV GDHGHRRQRP ASLEGASSSR RAVAAVADRA ARGSHRAARQ
PARRGRYLCL CHAGSLDASM WQNNERKARF IAAALSGDTS IRRLEDMGEG QANQFAMAKA
IASGDERLMQ KAGLEADIAR LERLRAAHED DLFAVRRQVR DAEREIETAT RRIVEIGQDI
ERLVPTSGEA FTMAVTGKPY TERKDAGRAL MKEILTLVQL QQESKVHIAT VGSFDLVYDG
EKFGRSDNYR YQTLLQRTGA DRHASGCHLA PRACSRRVRP GAGALPPAVG GIPTSPGILS
VAEGWHLRLC R
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