| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8079 |
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| Symbol | |
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| ID | 7365187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 55167 |
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| End bp | 56579 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643641726 |
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| Product | helicase SNF2 family |
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| Protein accession | YP_002540023 |
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| Protein GI | 222080160 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0827] Adenine-specific DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.48311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA ATCCCTTCAC ACTCGATATG TTCGGCAATA CCGCTCTCTC GCCGGGACTT
GGTCTCGGCG TCACGGCCTT CGGCAGCTTT TCAGCCCCTG CCAACGATGA TGAACCAGAG
CCGACGCCGC CCGCGCCCGC CGCAGCCTTG TCCGTCAGCG CGACCAAACA GCCGCCGCGC
AGACAGGGGC ATCGCGCCAA CTTCTATCTC GACAGCGAAG ACCGCGGCCT TGCGGCAAGC
TGGAAGGAGC GGGCACGGAT GAATGTCGCC GCCATCGTTA CCGCCAACGA GATCGAAAAT
CACAACATAC CCGTCACCCG CGAGCATCAG AGGAAGCTGA TCCGCTTCAC GGGTTTCGGG
GCATCGGAGC TTGCCAACGG CATGTTCCGC AGGCCGGGTG AGATGGAGTT TCGCAAGGGT
TGGGATGATC TCGGCACATC GCTGGAAACG GCGGTCGCCG AATCCGACTA TGCTTCACTC
GCCCGTTGCA CCCAATATGC CCACTTCACA CCGGAGTTTA TCATCCGGGC AATCTGGTCT
GGCCTGCAAC GGCTCGGCTG GCGTGGTGGA CGCATTCTGG AGCCAGGTAT TGGTACGGGG
CTGTTTCCGG CACTGATGCC CGAAGCCTAT CGCGACAACA GCTTTGTCAC CGGGATCGAG
CTCGACCCGG TCACCGCCCG TATCGCCCGG CTGCTTCAGC CGAGGGCGCG GATCATCAAC
GCGGACTTTG CCCGCACCGA TCTGGCGCCG ATCTATGACC TGGCCATTGG CAATCCGCCC
TTTTCCGATC GCAGCGTCCG TTCTGACCGA TCCTATCGCA AGCTCGGCCT TCGCCTCCAT
GACTACTTCA TTGCACGGTC AATCGATCTG TTGAGGCCCG GTGCGCTGGC CGCCTTCGTG
ACCAGCTCCG GCACGATGGA CAAGGCGGAT GCCACAGCGC GCGAGCATAT TGCGAGGTCT
GCGGACCTGA GCGCCGCCAT TCGATTGCCG GAGGGCAGCT TCCGTCGCGA CGCCGGCACG
GATGTCGTCG TCGACATCCT GTTCTTCCGC AAGCGCAAGG TCGGCCAAGC CGAGGGCGAC
CAGGACTGGC TCGATCTGGA AGAAGTTCGT CCCGCGACAG AGGACGAAGG CGCTATTCGC
GTCAACCGCT GGTTTGCTCG GCACCCGGGT CTGGTGCTGG GCGAACATGC GCTGACCTCG
GGTCCGTTCG GTGAGACCTA CACCTGCCTG CCAAGCACCG GGGAGGATCT GGAAGTGGTG
CTTCAAGAGG CCATCGCCCT TCTTCCCGAA GGAATTTACG ACGGTGGGCC GACGCCTGTG
GACATCGACT TGGAGGAGGA ACTCGGTGAT ATCGTTGATC TAATACCAGC CTGCGTTGAG
GCTGACTCAG GTTGTGGATT CCCAAAGCGA TGA
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| Protein sequence | MSNNPFTLDM FGNTALSPGL GLGVTAFGSF SAPANDDEPE PTPPAPAAAL SVSATKQPPR
RQGHRANFYL DSEDRGLAAS WKERARMNVA AIVTANEIEN HNIPVTREHQ RKLIRFTGFG
ASELANGMFR RPGEMEFRKG WDDLGTSLET AVAESDYASL ARCTQYAHFT PEFIIRAIWS
GLQRLGWRGG RILEPGIGTG LFPALMPEAY RDNSFVTGIE LDPVTARIAR LLQPRARIIN
ADFARTDLAP IYDLAIGNPP FSDRSVRSDR SYRKLGLRLH DYFIARSIDL LRPGALAAFV
TSSGTMDKAD ATAREHIARS ADLSAAIRLP EGSFRRDAGT DVVVDILFFR KRKVGQAEGD
QDWLDLEEVR PATEDEGAIR VNRWFARHPG LVLGEHALTS GPFGETYTCL PSTGEDLEVV
LQEAIALLPE GIYDGGPTPV DIDLEEELGD IVDLIPACVE ADSGCGFPKR
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