Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_8072 |
Symbol | |
ID | 7365180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011982 |
Strand | - |
Start bp | 49695 |
End bp | 49979 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643641719 |
Product | transposase |
Protein accession | YP_002540016 |
Protein GI | 222080153 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGAT TTGCCCGTGA TCCTCTTTAT CGTCTCCATC GATTTACAGC CGAGGTGATT GCCCATGCCG TTTGGCTCTA TTTCCGGTTT CCGCTGAGCC TGCGGATGGT CGAGGATATG CTGGCTGCCC GTGGCCTCAT CGTCTCTCAC CAAAACGTGA GGCTCTGGGC GGAGAAGTTC GGTAGACATT TTGCCAATGA TATCCGCAAG CGATCTGCCG GCAGGCTCGG TGACAAATGG CACTTCGACG AGGTTGTCAT CACGATCGCC GGCAAGAAAC ATTAG
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Protein sequence | MTRFARDPLY RLHRFTAEVI AHAVWLYFRF PLSLRMVEDM LAARGLIVSH QNVRLWAEKF GRHFANDIRK RSAGRLGDKW HFDEVVITIA GKKH
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