Gene Avi_8072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_8072 
Symbol 
ID7365180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011982 
Strand
Start bp49695 
End bp49979 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content54% 
IMG OID643641719 
Producttransposase 
Protein accessionYP_002540016 
Protein GI222080153 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGAT TTGCCCGTGA TCCTCTTTAT CGTCTCCATC GATTTACAGC CGAGGTGATT 
GCCCATGCCG TTTGGCTCTA TTTCCGGTTT CCGCTGAGCC TGCGGATGGT CGAGGATATG
CTGGCTGCCC GTGGCCTCAT CGTCTCTCAC CAAAACGTGA GGCTCTGGGC GGAGAAGTTC
GGTAGACATT TTGCCAATGA TATCCGCAAG CGATCTGCCG GCAGGCTCGG TGACAAATGG
CACTTCGACG AGGTTGTCAT CACGATCGCC GGCAAGAAAC ATTAG
 
Protein sequence
MTRFARDPLY RLHRFTAEVI AHAVWLYFRF PLSLRMVEDM LAARGLIVSH QNVRLWAEKF 
GRHFANDIRK RSAGRLGDKW HFDEVVITIA GKKH